KEGG   Ascochyta rabiei: EKO05_0001076
Entry
EKO05_0001076     CDS       T09445                                 
Name
(RefSeq) DNA-directed RNA polymerase
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
arab  Ascochyta rabiei
Pathway
arab03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:arab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EKO05_0001076
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:arab03021]
    EKO05_0001076
Enzymes [BR:arab01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     EKO05_0001076
Transcription machinery [BR:arab03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     EKO05_0001076
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 62210616
NCBI-ProteinID: XP_059491555
LinkDB
Position
2:join(446083..446264,446548..449815,449863..451581)
AA seq 1722 aa
MNTAQPTSSAIEGVEFGFLSAPDVRALSVKRVTNPTTFDSLLHPVSGGLHDAALGAFLDN
PCATCGLTTMLGCPGHCGHIELPVPVYHLTFMDQLLRLLRGKCAYCHNLKLARVQVNEFV
SRLRLIRCGLVKEANEMHEFVDASKGKKKNKDVADSEDDDDDENEDIVGQRNNYVKRCMK
RAGISKHHARSAREKNDTIAEARRLVLKDFYAAIVAGKKCRNCQAINPTFRKDKSIKIFR
RNLSAKEKAQMAQSEKRLQNPLDILARRDAKAKNMSVHDDEGLADMSEGDSDEGIDIDMD
MDDGSLTATEARTATKTRTATDAADSSQEYITAAEVKAAMILLFEQEAEILRLIYSPYGA
SAVSPDMFFMEAIIVPPNRYRMEDKTGDSIAESPKNSLYKGILNACDSMRQISNEMKGQE
NEAGYRRRNFDDLQNTWVNLQGAVNAVIDRDANPVQGKAGLTNADGIKQHLEKKEGLFRK
NMMGKRVNFAARSVISPDPNIETNEIGVPPVFAKKLTFPEPVTNHNFYDMKEAVLNGPDK
WPGAVAIENEFGQVVTLKKKNYEERLALANQLLAPSSTFSNGSKNKKVHRHLNNGDVVLM
NRQPTLHKPSMMAHRARVLPGEKTIRMHYANCNTYNADFDGDEMNMHFPQNELARAEAMT
VADTDHQYLSATAGKPLRGLIQDHISMGVWLSNKDTFFTREDYQQLMYAALRPEDGHTTS
GRLEMVEPAIWKPQPLWTGKQIFSSILKNIKPAEYQDLTLESKSSTNGKLWGAYSEEQQV
IVKDGELMCGIIDKSQIGPAPGGLINGIYEAYGETIAGRALSIIGRMLTKLLHMRAFSCG
VEDLILTAEGDQARLEKLKAAERVGFEVASKYVSLDATKITPTTGELQTRLERVLRDDGK
QHGLDLLANSATASVSSAVTQACLPHKLIKLFPKNQMQAMTGSGAKGSLVNANQISCNLG
QQVLEGRRVPVMVSGKTLPCFKPYETSVRAGGYIVNRFLTGVRPQEYYFHMMAGREGLID
TAVKTSRSGYLQRCIIKGMEGLKVEYDTSVRDSDGSMVQFLYGEDGLDITKQKYLNDFKF
QAQNFLSLAQSLNTQEAFGKVHSQEAADHNKKAVKKAKKDAGAMDPATAVYAPGRHSGST
SEKFFQAKKEYVDDNKDKLLKNKKKDPDGEILKKSFEQMLDLKYLRSLVEPGEAVGVVAG
QSIGEPSTQMTLNTFHLAGHSAKNVTLGIPRLREIVMTASAKISTPGMTMYPHDELPKDH
QERFAKSITRLPLSAVLDKVTVTESSGAGTQFSQARTYKVRLDLYPAKEYTQEYAIKVRD
VAESIEQKFCPRLQKIMRADLKKKGENKSLSTANASVPQVGQSSGRVEEHAVRESDERAG
REVGPEDDDSDDGEGDGDTTHAKQRGRREDSVGYEEPEEEEQALNDALDHDEAVSDEDEA
YGGSPKPSRASSPNSDDDSPDDEQLLVPTDEASDIRKDRIINKNADVFDFKFDDKKGEYC
EITFEFPLAAPKLLVLHHVEAAAEFATIHVIPGITSAMISKEDGKDASGKKIDVPVIMTE
GSNLLAIREFHDIIDVNRVFTNDIVAMLQLYGVEACRATIVREMHAVFSGHGISVDQRHL
NLIADTMTKGGGYTPFNRIGLRGNVSPFMKMSFETTVGFLRDAVLERDWDDLKNPSARVV
VGRLGGIGTGAFDVLAPVQVIDPLKSDVLPGIEEEDVEMAGA
NT seq 5169 nt   +upstreamnt  +downstreamnt
atgaacacggcccagcccacgtcatcggccatcgagggcgtcgagttcggcttcctctct
gcgcccgacgtccgcgccctctcggtcaagcgcgtcaccaacccgaccacgttcgactcg
ctgctgcaccccgtgtctggcggtctgcacgatgccgccctgggcgccttcctcgacaat
ccatgtgcgacatgcggcctcaccaccatgctcggctgccccggccactgcggccacatc
gagctgcccgtccccgtctaccacctcaccttcatggaccagctgctgcgtctgctgcgc
ggcaagtgcgcctactgccacaacctcaagctcgcccgcgtgcaggtcaacgagttcgtc
tcgcgcctgcgcctgatccgctgcggcctggtcaaggaggccaacgagatgcacgagttt
gtcgacgccagcaagggcaagaagaagaacaaggacgtggctgactccgaggacgacgac
gacgacgagaatgaagacatcgtcggccagcgcaacaactacgtcaagcgctgcatgaaa
cgcgcgggcatctccaagcaccacgcccgctccgccagggagaagaacgacaccatcgcc
gaggcacggcgccttgtcctcaaggacttctacgcagccattgtagccggcaagaagtgc
agaaattgccaggccatcaacccgaccttccgcaaggacaagagcatcaaaatcttccgc
cgcaacctgagcgccaaggagaaggcccagatggcccagtcggagaagcgcctgcagaac
cccctcgatatcctcgcccgccgcgacgccaaagcaaaaaatatgtccgtgcacgacgac
gaaggcctggccgatatgtcagagggcgactcagacgagggcatcgacatcgacatggac
atggacgacggctcgctcaccgccaccgaagcccgcaccgctacaaaaacacgcaccgcc
acagacgcagccgacagctcgcaggagtacatcaccgccgccgaggtcaaggccgctatg
attctgctgttcgagcaggaagccgagatcctgcgcctcatctacagcccctacggcgcg
tccgccgtcagcccggacatgttcttcatggaggccatcatcgtcccgcccaaccgctac
aggatggaggataagacaggagattccatcgccgaatcgcccaagaacagcttgtacaag
ggcatcctgaacgcgtgcgactcaatgcgccagatcagcaacgagatgaagggccaggag
aacgaggctggctacaggcggcgcaacttcgacgacctgcagaacacctgggtcaatctg
cagggcgccgtcaatgccgtcatcgaccgcgatgcgaaccccgtccagggcaaggccggt
ctcaccaacgccgacggtatcaagcagcaccttgagaagaaggaaggtctcttccgtaag
aacatgatgggaaagcgtgtcaacttcgccgcccgctctgttatctcgccagaccccaac
atcgagaccaacgagattggtgtaccgcctgtcttcgccaagaagctcaccttccctgag
cctgtgacgaatcacaacttctacgacatgaaggaggcggtcctgaacggccctgacaaa
tggcctggtgcggtggctattgagaacgaatttggccaggtcgtcacgttgaagaagaag
aactacgaggagcgtcttgccttggcgaaccagctgcttgcaccgtccagcactttctcc
aacggctctaaaaacaagaaggtgcaccgccatctgaacaacggcgatgtggtcctcatg
aaccgacagccgacacttcacaagccttccatgatggcgcatcgagcccgcgtcctgcct
ggagagaagacgattcgcatgcactacgccaattgcaacacctacaacgccgacttcgac
ggtgacgagatgaacatgcattttccccagaacgagctggcgcgcgccgaggccatgaca
gtcgccgacacagatcaccagtatctctcggcaacggctggaaagccgttacgtggtctc
atccaggatcatatctccatgggtgtctggctctcgaacaaggacactttctttacacgc
gaagattatcagcagctgatgtacgccgccctacggcctgaggacggccacaccacctct
ggcagactcgagatggttgagcccgctatctggaaaccgcagcctttgtggaccggcaag
cagatcttctcgagcatcctcaagaacataaagcccgctgaataccaggacctgacgctc
gaatccaagtcgtctaccaacggcaagctttggggcgcctacagcgaagagcagcaggtc
atcgtcaaggacggtgaactcatgtgcggaatcatcgataagagccagattggtcctgcc
cctggtggcctcatcaacggtatctacgaggcctacggcgagacgattgctggccgtgct
cttagtatcattggtcgcatgcttactaagctgctgcacatgcgcgctttctcttgtggt
gttgaggatctgatcctgacagctgagggcgaccaggcgcgtctagagaagctcaaggca
gcggagagggttggtttcgaggttgcctccaagtatgtcagcttggatgccactaagatc
acgcctactaccggtgagttgcagacccgcctggagcgtgtgctgcgagacgacggcaag
cagcacggcctcgatctgctggccaacagcgctactgcgagcgtttcatccgcagtcaca
caagcatgtctgccacacaagctcatcaagctcttccccaagaaccagatgcaggctatg
acaggctctggtgcaaagggtagtttggtcaacgccaaccagatctcgtgcaatctgggt
cagcaggtcctggaaggtcgccgtgtgccggtcatggtcagcggtaagacactgccctgc
ttcaagccgtacgagacaagcgtgcgcgcaggtggctacattgtaaatcgtttcttgact
ggtgtccgaccgcaagagtactacttccacatgatggccggtcgcgaaggtctcattgat
accgctgtcaagacatcacgctccggttacctgcagcgatgcatcatcaagggcatggaa
ggcctcaaggtggagtacgacacgtcggtgcgtgactcagacggtagcatggtgcagttc
ctgtacggcgaggacggtctcgacatcaccaaacagaaatacctgaacgacttcaagttt
caagcgcagaacttcttgtcgcttgcgcagtcacttaacacgcaagaagccttcggcaag
gtgcacagccaggaggctgctgatcacaacaagaaggctgtcaagaaggccaagaaggat
gctggcgccatggacccggctacagcagtctacgcccctgggcgtcacagcggtagtaca
tccgaaaagttcttccaagcgaagaaggagtacgtcgacgacaacaaggacaagctgctc
aagaacaagaagaaggaccctgatggcgagatcctcaagaagagcttcgaacagatgctt
gatctcaagtacctccgctcccttgtcgagcctggcgaggctgtcggtgtcgtcgctggt
cagtccattggtgagccctcaacacagatgacgctcaacaccttccatttggctggtcac
tccgcaaagaacgtcacccttggtatccctcgtctccgagaaatcgtcatgacggctagt
gcaaagatctccactcctggcatgaccatgtaccctcatgatgagctgcccaaggaccac
caggagaggttcgcaaagagtatcacccgcctgccgctttcagccgtactggacaaggtc
acggtcaccgagtcatctggcgccggcacacagttcagccaagcaaggacttacaaggtc
cgccttgatctctacccagccaaggagtacacacaagaatacgccatcaaggtccgtgac
gttgccgagtcgattgagcagaagttctgtccacgcctgcagaagatcatgcgtgcagat
ctgaagaagaagggcgagaacaagtcgctatcgactgccaacgcatcggtaccccaggtc
gggcagtccagcggccgtgtcgaggagcacgccgttcgcgaatctgacgagcgtgctggt
cgagaagtcggtccagaggacgacgacagcgacgacggtgagggcgatggcgacaccaca
cacgccaagcagcgcggccgtcgtgaagacagcgtcggatatgaagagccagaagaggag
gagcaggctctgaacgacgccctcgaccacgacgaggcagtgtcggacgaggacgaggcc
tacggcggaagccctaagccatcccgagccagctcccccaactctgacgacgactcaccc
gacgacgagcagctcctcgtccccacagatgaagcctcggacatccgcaaggaccgcatc
atcaacaagaacgctgatgtgttcgacttcaaattcgacgacaagaagggcgagtactgc
gagatcacttttgagttcccgctcgccgcgcccaagctcctcgtcctccaccacgtcgaa
gcagccgccgagtttgctaccatccacgtcatccccggtatcacctccgccatgatctcc
aaggaagacggcaaggatgcaagcggcaagaagatcgacgtccccgtcatcatgaccgag
ggctctaacctcctcgccatccgcgagttccacgacatcatcgacgtcaaccgcgtcttc
accaacgacattgtcgccatgctgcagctgtacggcgtcgaagcgtgtcgcgccactatt
gtgcgcgaaatgcacgctgtattcagcggtcacggaatctcagtcgaccaacgtcatctc
aacctcatcgccgataccatgaccaagggcggcggctacacgcccttcaaccgcatcggc
ctcagaggcaacgtcagtccgttcatgaagatgagtttcgagaccaccgttggtttcctc
agggacgctgtcctcgagcgcgattgggacgacctaaagaacccctctgctcgcgttgtt
gtgggcagactgggcggcatcggcacaggcgcgttcgatgtcctagctcccgtgcaggtc
atcgacccgctgaagagcgacgtgctgccaggcatcgaggaagaggacgtcgagatggca
ggcgcatga

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