Ascochyta rabiei: EKO05_0001083
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Entry
EKO05_0001083 CDS
T09445
Name
(RefSeq) Rhamnogalacturonan endolyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
EKO05_0001083
Enzymes [BR:
arab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
EKO05_0001083
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GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Dioxygenase_C
RhgB_N
Motif
Other DBs
NCBI-GeneID:
62210621
NCBI-ProteinID:
XP_038801844
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All DBs
Position
2:complement(join(484900..485922,485968..486419,486477..486708))
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AA seq
568 aa
AA seq
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MGGFKLLSLAAFAGSTLGAPLEERAKQPKSFFKEVGNSTWVIGNDVWNVTQNLQYANKLW
YKGKDRVGQAVGHYVSYNGAASDLKWTSALVVDTGSDWINIKFTAIEGDMHWVIYDGLHG
SYQYFVNRALPTLGEFRTLWRLDNVSFPNARTNVRDGPLPALAEYTISTNVQDETWQKPD
GTFLTKYDWSSNVRDNDFHGVYGDEVGSWYLNPGKDYFNGDHLKQELFVHRESKTGDAVQ
LNMIHGTHYQAVSRDVFVDGKVWGPWLWYLNDGSKDDAAARAAKEESAWPYKWYNDKAYQ
SRGKIQGRLLLSDGRPAAGAAVFLGDNNNSTISTLDQGKDFYYTSYADVDGKFSFKDVRT
GSYALQAWGNGGAIGDVTTNFTQNDVVIRKGDTTNLKDLKWKVTDKSKRIFQIGDFDRKS
DGFALADANKPFEHGRISKAPGNLTYTVGTSTAKDWYFGQSALGTWSVNFPVKSAAASKL
TVSLAGFSQGSSCDILLNNVKIGNITSASLLNSQDTYRGATRNGEWRLLEFPVSAETFKN
GTNKLDIKVTRTSQWRGWLWDSLVLDQV
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgggtggattcaagcttctcagcctcgctgccttcgcaggctcaactctaggcgcacca
ctcgaagaacgtgcgaagcaacccaagagcttcttcaaggaggtcggcaactcgacctgg
gtaatcggcaacgatgtctggaatgtcacacaaaacctacagtatgccaacaagctctgg
tacaaggggaaagacagagttggacaggccgtgggtcattatgtgagctacaacggcgct
gcttctgacctcaagtggacatctgctttagtcgtcgacacaggcagcgactggatcaac
atcaagtttacggccatcgaaggggacatgcattgggtaatctacgacggccttcacgga
tcgtaccaatacttcgtcaaccgcgctctccctacgctgggcgagttcagaaccctctgg
cgtctcgacaacgtctccttccctaatgcccgaacaaacgttagggacggtcccctgcca
gcccttgctgagtacaccatctcgacaaacgtacaagacgagacctggcagaagcctgac
ggtaccttcttgacaaagtatgactggagcagtaacgtccgagacaacgatttccacggt
gtctatggcgatgaagtaggaagctggtacctgaaccctggcaaggactatttcaatggc
gaccatctgaaacaagaactctttgtccatcgcgaatctaagactggcgatgcagtccaa
ctgaacatgattcatggtacacactaccaggccgtttcgcgcgatgtcttcgtcgacggc
aaagtctggggcccttggctctggtacctaaacgatggctccaaagacgacgccgcggcc
cgcgccgctaaggaggagtcagcatggccctacaagtggtacaacgacaaagcctaccag
tcacgtggtaagatacaaggtcgccttcttttgagcgacggccgcccagccgccggcgca
gccgtcttccttggcgacaacaacaattcaaccatctccacgctcgatcagggcaaggac
ttctactacacctcctacgccgatgtggacggtaaattctctttcaaagatgtccgcact
ggttcgtacgcgctgcaagcctggggcaacggtggggcgatcggcgatgtgaccaccaac
ttcacacaaaacgacgtagtaatccgcaagggcgataccacaaatctgaaggacttgaag
tggaaagtcacagacaagagcaagcgcattttccaaatcggcgatttcgaccgcaagtcc
gacggtttcgcgctcgcagatgccaacaagccattcgagcacggccgcatttcaaaggca
cctggcaacctcacctacaccgtcggcaccagcaccgcaaaggattggtactttgggcaa
tctgcgcttggcacatggtctgtgaacttccccgttaagagtgccgcggcatccaagttg
accgtgtctcttgccggcttctcgcaaggctcaagctgtgacattttgctcaacaatgtg
aagattggaaacatcactagcgcgagtctgctcaacagccaggacacataccgcggtgca
acgaggaatggagagtggagactgttggaattcccggttagcgccgagacgttcaagaac
gggacgaacaagctggacatcaaggtcacaaggacctcacagtggagaggctggctgtgg
gacagcttggtgctggatcaggtctaa
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