Ascochyta rabiei: EKO05_0001193
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Entry
EKO05_0001193 CDS
T09445
Name
(RefSeq) MSH2 protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
arab
Ascochyta rabiei
Pathway
arab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EKO05_0001193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arab03400
]
EKO05_0001193
DNA repair and recombination proteins [BR:
arab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
EKO05_0001193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
Motif
Other DBs
NCBI-GeneID:
62210727
NCBI-ProteinID:
XP_038801950
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Position
2:join(813782..813937,813989..816601)
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AA seq
922 aa
AA seq
DB search
MASRPEMREDDESGFCKFFRNLPLKNDDTVRIFDRGNYYSAHGEDAKFIANNVYRTTAVL
RKLGREPGLESVTMTTMVFRNFLRDALFRLSKRIEIWQSTGKRMDWKVVKQASPGNLQDL
EDELGGHIENSPIILAVKISAKASEARNVGVCFADASVRELGVTEFLDNDLYSNFESLLI
QLGVKECLIQADGNKKDVELNKLRTIADNCGCAVAERGAADFGTKDTEQDLPRLLKDEGA
AGTLPQTDLKLAMGSAACLIRYLGVMSDTSNFGQYQLYQHDLTQYMKLDAAALKALNLMP
GPRDGAKNMSLYGLLNHCKTPTGSRLLSQWLKQPLMNLAEIERRQQLVEAFVNDTELRQT
MQEEHLRSIPDLYRLAKKFQRKAANLEDVVRAYQVIIRLPGFLESLDAVMDEQYKDPLDA
EYTSKLRQYSAAFLGLQDMVETTVDLDALDNHEFIIKPEFDEALRTIRKRLDRLKREMES
DHMKAGDDLNQDTEKKLFLENHKVHGWCFRLTRNEAGCIRQKKQYQEISTQKNGVYFTTP
SLLEKRREFDQLSENYNRTQSGLVNEVVAVASSYVPVVEKLAAVLAHLDVIVAFAHVSVH
APTSYTRPTMHPRGTGNTILKEARHPCLEMQDDVSFITNDVSLVRNESEFLIITGPNMGG
KSTYIRQIGVIALMAQIGCFVSASEAELTIFDCILARVGASDSQIKGVSTFMAEMLETAN
ILKSATKESLIIIDELGRGTSTYDGFGLAWAISEYIVKEIGAFALFATHFHELTALVDTY
PQVQNLHVVAHISEGTAETEGGVQKKREVTLLYKVEQGFSDQSFGIHVAELVRFPQKVIS
MAKRKADELEDFAGKHEEGFVQASREEVEEGSKMLKEMLAKWKQEVESQGLTKKQQVERM
RELVRENQALQGNGFFKGIQAL
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagaccggagatgcgagaagacgatgagtctggcttttgcaagttcttccgc
aacctcccgttgaaaaacgacgataccgtccggatattcgaccgaggcaattactacagt
gcccatggcgaagatgcaaaatttatcgcaaacaatgtctaccggacgacagccgtactg
cgcaagctgggccgagagccgggcctcgaatctgtcaccatgaccacgatggtcttccga
aactttctccgagatgcactcttccgcctgagcaaacgtatagaaatctggcagtcgaca
gggaagcgaatggactggaaggtggtgaagcaggcttcacctggtaacctgcaggacctg
gaggacgaacttggtgggcatattgagaattcgccaatcatactggctgtcaagataagt
gccaaagcttcagaagcacgtaacgtcggtgtctgcttcgccgatgcaagcgtgcgggag
ctcggtgtgacggaatttctcgacaacgacctatattcgaacttcgagtcgcttctgatt
caacttggcgtgaaagagtgcctaatccaggcagacggaaacaagaaagacgttgagttg
aacaagcttcggacaatcgcagacaattgtgggtgcgctgttgcagagcgaggagccgcc
gactttggtaccaaagataccgagcaggatctcccgcgtttgttgaaagatgaaggcgcg
gctggcacactgccgcaaaccgatctcaaactagcaatgggttcggcagcttgtctgatc
aggtacctgggcgttatgtccgatacatccaacttcggccagtatcagctgtatcagcac
gacctcacacaatacatgaagcttgatgcagcagctttgaaggcgctgaacctgatgcca
ggacccagggacggagcaaagaatatgagcttgtatggcttactcaaccattgcaagaca
cccactggtagccgactgctttctcagtggttgaagcaacctctcatgaaccttgctgag
attgagaggcggcaacagctcgttgaggcatttgtcaatgataccgagctacggcagact
atgcaggaagaacatctgcgatccatacctgatctgtacaggctcgcaaagaagtttcaa
cgcaaggctgcgaatctcgaggatgttgtccgcgcgtatcaggttatcattcgtctacct
gggttcctggaatcgcttgatgctgtcatggacgagcagtacaaggatcctctggacgcg
gaatacacctcgaaattgcgacaatactcggcagctttcttaggcctacaggacatggtt
gagacgacagtggatcttgatgcactggacaaccacgagttcatcatcaagcccgagttt
gacgaagcattgcgcacgattcgtaagcgccttgatagactcaagcgcgagatggagtcg
gaccacatgaaggccggagatgatctgaaccaagacacagagaagaagctgttcctcgag
aatcacaaagttcatgggtggtgcttcaggttgaccaggaatgaagcaggttgcatacga
cagaagaaacaataccaggaaatctcgacacagaagaacggcgtctacttcacaacacca
tccctgctggagaagcgccgagaattcgatcagttgtcggagaactacaaccgaacacaa
tcagggcttgtcaacgaggtcgttgccgtagcttcgtcgtacgtcccagtcgttgagaag
ctggctgctgtgctcgcacatcttgatgtgattgttgcctttgcacacgtgtcagtgcat
gcacctacatcgtacacgcgaccgacaatgcatccgcgtgggactggcaacaccatttta
aaggaagctcgacacccctgcctcgagatgcaagacgacgtatctttcattacgaacgat
gtcagcttggtacgcaacgagagcgagtttctcatcataacagggccaaatatgggtggc
aaatcgacatacattcgacagatcggtgttattgccctcatggcacagattgggtgcttt
gtctcagcctcagaagcagagcttaccatcttcgactgcatacttgcgagagtaggcgca
agtgatagtcagatcaaaggtgtctccaccttcatggcggagatgctggagactgcgaac
attctcaaatcggccacaaaagagtcgctcatcatcatcgacgagctgggtcgcggcaca
agcacatatgacgggtttggtcttgcatgggccatatccgagtacatcgtgaaggagatt
ggcgcttttgcgctcttcgcgacacacttccacgagctcactgctcttgtggatacctac
cctcaggttcagaacctgcatgtcgtagcacacatatcagaaggtactgcagagacggaa
ggcggagtgcagaagaagcgtgaagtcaccctgctctataaagtcgagcaaggtttctca
gaccagtcgtttgggattcacgtggccgagctagttcgctttccacagaaggtcatcagc
atggccaagcgaaaggcagacgagcttgaagacttcgcagggaagcacgaagagggtttc
gttcaggcaagcagggaggaggttgaggagggaagcaagatgctcaaggagatgctggcc
aagtggaaacaggaagtggaaagccagggcctaaccaaaaagcagcaggtcgagcgaatg
cgcgagctcgtcagggagaaccaggcgctgcagggtaatgggttcttcaagggcatacaa
gcattgtaa
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