Ascochyta rabiei: EKO05_0001316
Help
Entry
EKO05_0001316 CDS
T09445
Name
(RefSeq) Protein mago nashi
KO
K12877
protein mago nashi
Organism
arab
Ascochyta rabiei
Pathway
arab03013
Nucleocytoplasmic transport
arab03015
mRNA surveillance pathway
arab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EKO05_0001316
09122 Translation
03013 Nucleocytoplasmic transport
EKO05_0001316
03015 mRNA surveillance pathway
EKO05_0001316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arab03019
]
EKO05_0001316
03041 Spliceosome [BR:
arab03041
]
EKO05_0001316
Messenger RNA biogenesis [BR:
arab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
EKO05_0001316
Spliceosome [BR:
arab03041
]
Complex C
Other components
EJC/TREX
EKO05_0001316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
62210850
NCBI-ProteinID:
XP_038802073
LinkDB
All DBs
Position
2:complement(join(1339084..1339098,1339146..1339271,1339323..1339410,1339460..1339523,1339572..1339667,1339719..1339756,1339808..1339839))
Genome browser
AA seq
152 aa
AA seq
DB search
MSSEPFYLRYYSGHQGRFGHEFLEFDFRVLGDGRSASARYANNSNYRNDSLIRKEMCVSD
ALVAEIKRIVKESEILKEDDTKWPQKNKDGRQELEIRLGSEHISFETAKIGSLQDVQDSS
DPEGLRVFYYLVQDLKALVFSLISLHFKIKPI
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgagccattctatctgagatattactcaggtcaccaaggccgatttggacac
gagtttctggaattcgacttccgggtgctgggagatggtcgcagtgcatctgcacgatac
gccaacaactccaactatcgcaatgactcccttattcgaaaagagatgtgcgttagcgat
gcactggtcgctgagatcaagcgcattgtcaaggaaagtgagatcttgaaggaagacgac
acgaagtggccacagaagaacaaggatggtcgtcaagagctcgagatcaggttgggtagc
gagcacatctcgttcgagactgccaagatcggatctctgcaagatgtacaagactcatca
gacccggaaggactccgtgtgttctactacctagttcaggatttgaaggccctggtcttc
tcgttaatctctctgcatttcaagatcaagcctatctag
DBGET
integrated database retrieval system
