Ascochyta rabiei: EKO05_0001352
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Entry
EKO05_0001352 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K11098
small nuclear ribonucleoprotein F
Organism
arab
Ascochyta rabiei
Pathway
arab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EKO05_0001352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arab03019
]
EKO05_0001352
03041 Spliceosome [BR:
arab03041
]
EKO05_0001352
03032 DNA replication proteins [BR:
arab03032
]
EKO05_0001352
Messenger RNA biogenesis [BR:
arab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
EKO05_0001352
Spliceosome [BR:
arab03041
]
Complex A
U1 snRNP components
Sm proteins
EKO05_0001352
U2 snRNP components
EKO05_0001352
Complex B
U1 snRNP components
EKO05_0001352
U4/U6.U5 tri-snRNP components
EKO05_0001352
Complex C
U2 snRNP components
EKO05_0001352
DNA replication proteins [BR:
arab03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
EKO05_0001352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
62210887
NCBI-ProteinID:
XP_059491636
LinkDB
All DBs
Position
2:complement(join(1450377..1450611,1450768..1450808,1450857..1450862))
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AA seq
93 aa
AA seq
DB search
MAAVAPFNPRPLLQSLVDKDIVVRLKWGETEYKGRLVSVDLYMNIQLSNTEEFVNGVSSG
TLGQVLIRCNNVLWIGQADSVEPKATKDTAMSG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgtcgcccccttcaacccccgaccgctgctccagagcctcgtcgacaaagac
atcgtcgtgcgcctcaagtggggcgagaccgagtacaagggcagactcgtctccgtcgac
ctctacatgaacatccagctctccaacacggaggaattcgtcaatggcgtcagctcaggc
acactcggccaggtcctgatacgctgcaacaacgtcctgtggattggccaggccgacagc
gtcgagcccaaggcgaccaaggacacggccatgagcggttga
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