Ascochyta rabiei: EKO05_0001407
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Entry
EKO05_0001407 CDS
T09445
Name
(RefSeq) Arp2/3 complex subunit, actin nucleation center
KO
K18584
actin-related protein 3
Organism
arab
Ascochyta rabiei
Pathway
arab04138
Autophagy - yeast
arab04144
Endocytosis
arab04517
IgSF CAM signaling
arab05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
EKO05_0001407
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
EKO05_0001407
04138 Autophagy - yeast
EKO05_0001407
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
EKO05_0001407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arab04131
]
EKO05_0001407
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
arab04812
]
EKO05_0001407
04147 Exosome [BR:
arab04147
]
EKO05_0001407
Membrane trafficking [BR:
arab04131
]
Others
Actin-binding proteins
Arp2/3 complex
EKO05_0001407
Cytoskeleton proteins [BR:
arab04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
EKO05_0001407
Exosome [BR:
arab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EKO05_0001407
Exosomal proteins of other body fluids (saliva and urine)
EKO05_0001407
Exosomal proteins of bladder cancer cells
EKO05_0001407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
MreB_Mbl
FtsA
Motif
Other DBs
NCBI-GeneID:
62210940
NCBI-ProteinID:
XP_038802163
LinkDB
All DBs
Position
2:complement(join(1577290..1578192,1578244..1578330,1578381..1578655,1578710..1578732,1578794..1578828))
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AA seq
440 aa
AA seq
DB search
MASQTPAVVMDNGTGYSKLGFAGNDSPSFVFPTAIATRGPTGGGGSSGSGRPAVANKPSF
LTGGAGPSGHLSGKRGTEDLDFYIGDEALSAAGGSGYGINYPIRHGQIDNWDLMERFWSN
SIFKYLRVEPEDHHFLLTEPPLNPPENREATAEIMFESFNVAGLYIAVQAVLALAASWTS
SKVQDRSLTGTVIDSGAGVTHVIPVAEGYVIGSSIKSVPIAGRDITQFVQSLLRERGEPD
SSLATAERIKEEYCYVCPDIVKEFARYDRESDDRFKQHTVTYANGKTTTVDVGYERFLAP
EIFFNPEIYSSDFLTPLPTIVDNVIQTSPIDVRRGLYKNIVLSGGSTLYKDFGRRLQRDI
RHLVDARIKASEARSGGAKSGGLDVQVITHKRQRHGPWFGGSLLGQTPEFRSYCHTKAEY
DEIGPSIVRRFALLGGPGST
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccaaacccctgccgttgtcatggacaacggtacgggatactcaaagctcggt
ttcgccggcaacgactccccctccttcgtcttccccaccgccatagccacacgaggacca
acaggcggcggcggtagctccggctctggccgcccagcagttgcgaacaagccctctttc
ttgaccggcggtgctggccccagcggccacctgtccgggaaacgcggcactgaggacctg
gacttctacattggcgacgaagctctctccgctgcaggaggctccggctatggcatcaac
tacccgatcaggcacggccagattgacaactgggacctcatggagcgcttctggtccaac
tcgatattcaagtacctcagagttgagcccgaggaccaccacttcctcctgactgagcct
ccactgaaccctccggagaaccgcgaagctaccgccgagatcatgttcgagtcgttcaac
gtcgccggtctgtacatcgctgtacaggctgtgcttgccctcgccgcctcctggaccagc
tcgaaggtccaagaccgatcgctcaccggtactgttatcgactcgggtgctggagttacc
cacgttatccccgtcgccgaaggctacgtcattggctcttcgatcaagagtgtgcctatc
gctggtcgcgacatcacccagtttgtgcagtcccttctgcgagagcgtggcgagccagac
tcgtctcttgcgaccgccgagcgcatcaaggaggagtactgctacgtttgcccggacatt
gtcaaggagtttgcgcgctacgaccgcgagtcggacgacaggttcaagcagcacacggtc
acgtacgcaaatggcaagacgactaccgtcgatgttggatacgaacgcttcttggcgcct
gagattttcttcaaccctgagatctactcttccgatttcctcacgcctctccccacgatt
gtcgataacgtcatccagacctcgcccatcgacgtgcgaagaggactgtacaagaacatt
gtactgtctggtggttcgacgctgtacaaggactttggtcgccgtctacagcgcgacatc
aggcacttggttgacgcgcgcatcaaggcatccgaggcacgcagtggaggcgccaagagc
ggcggtctggatgtacaggtcattacgcacaagaggcaaagacacggcccatggttcgga
ggcagtttgctcggtcagacgcccgagtttaggagttactgtcacaccaaggcagagtac
gatgagattggccccagcattgtccgacgatttgcgctgctgggcggaccgggcagcacc
tag
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