Ascochyta rabiei: EKO05_0001419
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Entry
EKO05_0001419 CDS
T09445
Name
(RefSeq) DNA helicase
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arab03021
]
EKO05_0001419
03036 Chromosome and associated proteins [BR:
arab03036
]
EKO05_0001419
Transcription machinery [BR:
arab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
EKO05_0001419
Chromosome and associated proteins [BR:
arab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
EKO05_0001419
SLIK complex
EKO05_0001419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Cdh1_DBD_1
AAA_22
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
62210952
NCBI-ProteinID:
XP_038802175
LinkDB
All DBs
Position
2:complement(join(1601513..1601660,1601711..1605137,1605192..1605836,1605888..1605963,1606012..1606038,1606087..1606517,1606949..1607114))
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AA seq
1639 aa
AA seq
DB search
MAAALARLLFGWSRAVVPQAQALESDFDILTHYPIPQSHQAPTPATQPEGSFVMDSTSIM
MPTSPGHVVSLPLTNGHGSPYAADTTMTNGLAPHSDSDISNAHEAAASEPASDADAPGED
DDEEDVEMAQDSDSSDDVDAEGEADGDYDSESPPPEQAESDDARSSASQESSRPSKRKAS
PEGDDYITQNPELYGLRRSGRARPHRRVVDSSDEEDESGSDMPRKRQRTASRKASKQPTP
VFRSADSESDSDGYVGPRRSMPSKKDRRRQLLVAQGSLPPSQAEVRFSSRRTAQATNYNE
EEDEDSFLESEDENTPAYWANVPEETGPIIDKVLDHRPPEGTEVDPSYAEKKDFEYLIKW
QDKAHYHSTWEDYRTAASYKGFRKLDNYFKGPVMADMYATYRRKQEPEEYEQHMVARETE
RQSQLDFQVVERVIDSQDGEDETEYFVKWKGLTYEFCTWEPASLVSRLSQIEIDRFLDRS
SNRPLSDLSESNIKTRRKFVKLDDQPDYIKFGRLRPFQLQGVNFLAHNWCRGTNVILADE
MGLGKTVQTVSFMNWLRHDRGQDGPFICVVPLSTMPAWADTFNNWTPDINYVIYTGREDA
RSIIRDKELLVDGNPRKIKFNVLLTTYEYVLADWQFLSSIKWQFLAVDEAHRLKNRESQL
YEKLRGFSAPSRLLITGTPIQNTLGELSALMDFLMPGKITVDEEVDLASEDASHKLAELS
DAIQPYMIRRTKEKVENDLPPKSEKILRVELSDIQLEYYKNILTRNYEALNEGGSGQKQS
LLNIVMELKKASNHALLFPNAEAKFIKGDATKDETLKALITTSGKMMLLDRLLTKLKKDG
HRVLIFSQMVHMLDILTDYLKLRNYTYQRLDGTVPASERKIAIDHFNAPGSDDYCFLLST
RAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQQKPVSVYRLVSKDTIEEEILE
RARNKRMLEFITIQRGVTDRQQKELNDKMSRAATEPNSADDINNILKRRGQKMFEQSGNQ
KKLEELDIDSVLENAEEHKTEQAAGLTSDGGAEFLKNFEYTDVKIDLEWDDIIPKEELEV
VKAEIQQRKDEEQTQKLLDESAPRKRKAASASAREQRAAKKRAMEASRDVDVDDDEPSED
DNVKRDPKRPLNTKETRNLIRAYERYGSLDERAEEMLKAAKLSGRDMNVVSNTLNQVITT
SQDLVKQEQARLKKLEADENRAITKKDKKAVLFDFNGVKKLNAETIIDRPIEMRILKEAV
EGVQDWHNFRIADAIKPANYSCPWGAREDGMLSVGISRHGYGAWVQIRDDPELGLTDKFF
LEEHRVDKKEERTKGDEKNAKSPGAVHLVRRANYLLTVLKDKTGADPNAKRLMENHHRNN
KKHHLSAARRTDKASSVSASPAPAGHARKVVSRDLSRPLQRTHSNSENRRSEGRPDHRQH
DKPRHSDQYRPSETPRNRDDRGSVDRRSEHPERTDTPEFRRKVSGDLERQRSREDRPRPS
EERPRAPSQGQNPNRSVDLTPKMSKEKKPEDFVERKMRPVRDNLSRLKKATAKNYPQKET
MVKVLKTELIAIGNFIRAETRENAELEERLWNYMVNNHWPRTGVTVPQVKGMYSKMRSSE
MNGKQSTTPQQSNGQKTKS
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggcgctagcgcgcctgctcttcggctggagtcgtgccgtcgtgccccaagcc
caagccctggaatccgacttcgatatcctcacacactaccccatacctcaatcacaccaa
gcgcccaccccggccacccagcccgagggcagcttcgtcatggactctacgtccatcatg
atgcccacttcaccgggccatgtggtctctctcccactcacaaacggccatgggtctccg
tacgcggccgacacaacaatgacaaacggtctggcgccccatagtgacagcgatatctcc
aacgcccacgaagctgccgcatcggagccagcctctgatgccgatgcacctggcgaggac
gacgacgaggaagatgtggagatggcgcaagactcggattcctctgatgatgtcgatgcg
gaaggtgaggcagacggcgactacgactctgaatcaccgccgccggagcaggcagagagc
gacgacgcccgcagctcagcctctcaagagtccagcagaccgtcgaaacggaaggcaagc
ccagaaggagatgactacatcacacagaatcccgagctgtatggcctgcgtcgtagcggt
cgcgccaggcctcatcgtcgagtcgtcgatagcagcgatgaagaggatgaatctggctct
gatatgcctcgcaagcgacagcgcacagcctcgcgcaaagcgtctaagcaacccacaccc
gtctttcgatcagcagactctgagtctgactctgatggctacgttggccctcgtcgtagc
atgcccagcaagaaggaccgacgacggcaactgctcgtggcccaaggatcgctgcccccg
tcacaagcggaggtccgcttctcctcgcggcgcactgcacaagctaccaattacaacgaa
gaagaggatgaagattccttcctagaatctgaagatgagaacacacccgcctattgggcc
aatgtgcctgaagagaccggtcccatcatcgacaaggtgctcgatcatcgcccaccagag
ggaacagaagtcgacccctcgtacgccgagaagaaggacttcgagtaccttatcaaatgg
caagacaaagcacattatcactctacatgggaagattaccggacagcagcctcatataaa
ggctttcggaagctggataactacttcaaaggtcccgtcatggctgacatgtacgctacc
taccgaaggaagcaagagcctgaggagtacgagcagcacatggttgcccgtgagactgag
cgtcaaagccagcttgacttccaagtcgtcgaacgtgtcattgattcacaagatggtgaa
gatgagacggagtatttcgtcaagtggaaaggtctgacatacgagttctgcacatgggag
cctgcttccctggtcagccgtctttcgcagatcgagatcgaccgtttcctcgaccgctcc
tcgaatcgtcccttgtccgacttgagtgagtcgaacataaagacaagacggaagttcgtg
aaactcgacgaccagcctgattatatcaagttcggccgtttgagacctttccagttgcaa
ggcgtgaacttccttgcacacaactggtgtaggggaaccaatgtcatcctagctgacgag
atgggtctcggcaagactgtgcagaccgtctcattcatgaactggctgcgccatgatcgg
ggtcaagacgggccgttcatctgcgtcgtgcctctttcgacaatgccggcctgggctgat
accttcaacaactggacacccgacatcaactatgtcatctacacaggcagagaagatgca
cgaagcatcattcgagacaaagaacttctcgtcgatggcaatcccaggaaaatcaaattc
aacgtcttgttgacgacatacgaatatgttcttgcggattggcagtttctgtcgagtatc
aaatggcagttcctcgccgtcgatgaggcgcacagactaaagaatcgcgagtctcaattg
tatgagaagctgcgaggattcagcgctccaagtcgacttctcattacgggcaccccaatc
cagaacaccctgggtgaattatctgcgttgatggacttcctcatgccaggcaagatcact
gtcgatgaagaagtcgaccttgcgtcagaggacgcaagccacaagctcgccgagcttagc
gatgcaattcagccgtacatgattcgccgtacgaaagagaaagtcgagaatgacttgcca
cctaagtctgaaaaaattcttcgcgttgaactgtcggacatccagctggagtattacaag
aacatcctcactcggaactacgaggctctcaacgagggcggttctggccagaagcagtcc
ttgttaaacattgtcatggagctgaagaaagccagtaaccacgccttactcttcccaaac
gccgaggcaaaattcataaaaggcgatgctaccaaggacgagaccttgaaggccctcatc
actacgagtggaaagatgatgttgttagatcgacttctgaccaagctcaagaaggatggt
catcgtgtgctgatcttcagccagatggttcacatgctggacatcttgacagattacctc
aaactccgaaactacacatatcagcgcctggatggaactgtccctgcgagcgagaggaaa
attgcaatagaccacttcaacgctcctggaagtgacgattactgctttctcttgtcaact
cgtgccggtgggctgggcatcaacttgatgacggctgacacggtcgttctctttgattcg
gattggaatccccaggctgatctgcaagctatggctcgagctcatcgtattggtcaacag
aagcctgtgagtgtctatcgtctcgtctcgaaggatacgatcgaagaggagattctggag
cgagctcggaacaagcgtatgctggagttcatcaccattcagcgtggtgtcacagatcgc
cagcaaaaagagttgaacgacaaaatgagtcgtgctgctaccgaaccaaactctgcagac
gacatcaataatatcctgaagcgccgtggccagaagatgtttgagcagtcagggaaccag
aagaagcttgaagagcttgacattgactcggtcctcgaaaacgccgaagaacataagact
gagcaggctgcaggtttgacctctgacggcggtgcagagtttcttaagaactttgagtat
accgatgtcaagattgacctcgagtgggacgatattattcccaaggaagagctggaggtt
gtgaaagccgagatccagcagcgcaaggacgaggagcaaacccaaaaactccttgatgag
agtgctccccgcaaacgtaaggcagcctccgcgagtgcacgcgagcaacgcgcggcgaag
aagcgcgctatggaggcttcccgagatgttgacgtggacgacgatgagccgtcagaggat
gacaacgtcaaacgtgacccaaagcgccctctaaacacaaaagagacacggaacctgatt
cgtgcctatgagcgatacggttccctcgacgagcgggctgaagagatgctcaaggccgcg
aaactgagcggtcgtgacatgaacgtcgtcagcaataccctcaaccaagtcatcaccacc
agccaagatcttgttaaacaagagcaagcaaggcttaagaagctggaggccgacgagaac
cgtgctatcacgaagaaggacaagaaggctgtactattcgacttcaatggcgtgaagaag
ctgaatgctgagacgatcatcgatcgacccattgagatgcgtatccttaaagaggcagtt
gagggcgtgcaagattggcataatttccgcatcgcggatgctatcaagccagcaaactac
tcatgcccttggggtgctcgcgaggatgggatgcttagcgtaggtatttcccgtcacggt
tatggtgcttgggtgcagattcgggacgaccccgaactaggattgacggacaagttcttc
ttggaggaacaccgtgtcgacaagaaggaggagcggaccaaaggcgacgagaagaatgcg
aagtcccctggtgctgtgcacttggttcgccgtgccaactatctccttactgtcctcaaa
gacaagacgggtgccgatcccaacgccaagcgcctcatggaaaaccatcatcgcaacaac
aagaagcatcacttgagcgctgctcgccggaccgacaaggcatccagcgtttcagcgagt
cctgcgcctgctggtcacgccagaaaggtggtatcgcgcgatctcagtcgtccacttcaa
cgcacacacagcaacagcgagaatcgacggtctgagggtcgacctgaccaccgacaacac
gacaagcctagacatagtgaccagtaccgcccttccgaaacgccccgcaatcgcgacgat
cgaggcagtgttgacagacgttcggagcaccctgaacgcaccgatacaccagaattccgg
cgaaaggtcagtggtgatttagagcgacaacggtctagagaagatcgaccgcgtccctcg
gaagaacgacctcgtgcgccaagtcagggtcaaaaccccaaccgtagtgtcgacttgact
cctaagatgagcaaggagaagaagcctgaagatttcgtagagcgtaagatgcgaccagtg
cgcgacaatctcagccgtctgaagaaggcgacggcaaagaactatccacagaaagagact
atggtcaaagtgctcaagaccgagttgattgctattggcaacttcatccgtgcagagacc
cgtgagaacgccgagctggaggagcgtctgtggaactacatggttaacaaccactggcca
cgcaccggcgtcacggttccccaggtcaagggaatgtacagcaaaatgcgaagctctgaa
atgaacggcaaacagtccacaaccccacaacagagcaacgggcagaagacaaaatcgtag
DBGET
integrated database retrieval system
