Ascochyta rabiei: EKO05_0001928
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Entry
EKO05_0001928 CDS
T09445
Name
(RefSeq) Phosphodiesterase I
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
arab
Ascochyta rabiei
Pathway
arab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
EKO05_0001928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arab03400
]
EKO05_0001928
Enzymes [BR:
arab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
EKO05_0001928
DNA repair and recombination proteins [BR:
arab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
EKO05_0001928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
FAN1_HTH
AAA_10
Motif
Other DBs
NCBI-GeneID:
62217719
NCBI-ProteinID:
XP_038795396
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All DBs
Position
3:828663..831284
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AA seq
873 aa
AA seq
DB search
MALNLRSPSKHNQMITQFIRHPKSTNFDGENDRSPKRRRIGDVTKPPPTPRKNRNHADRV
ADSDTEEEDVVVKEEETDTKTDLESALPPIGTGTEAIKVYEAFKASQEEKPEGAEDRLKD
RTWVRGKSSLYVDAFNLALDTVLEEEHHLFDEAETELFRIWRELNYEAQYLYVRLFLRKT
SAWHRIKNLGYHSDLSDMDAAVQTLQRTFDLPASSAEVETHPGEQETPTDTTLAKTFTFA
DRSEHEITTLDEASSLLRLDELKALAKDAKVQGKNKRELLTALRRASKKQAGLGHVGLKR
SDTESSRQSRQSRQSSVSGTTTPEVEEPKAGDLSDLSDTANRDSHFTRKIMSETGSCIRL
SAATRKLFERVHLVFYRSTEWTEKSLTTIILAKIARRNFPEYIVSRSANIFASRPLLLEY
EASIRTQFRIDSILEFNGRPTDKDYQEVVDVFEDVYPRWQSLVEEEQRKEDSVYHSGEGS
YLRRLSPAWIYTRIIHKAMYVVARRKEHMREYDVTSALLQQRLFHHSRRGAWYQRKALLE
EHYMAALTPLERRSEEQQKKHWKRTALQTCERGLQDNLVHIIHHYDLQKRVTKLEKSLNI
PKRAQHDFTHVRLTKPLEITVEGTQILRAPPLNRRNSSPHPQNSNRRGGKTVWIDPRETG
ECSVEAMCLSYYRNLGWKGFHSEGGIVRTLFAYLFYDVLFTYVPNVFQTQYQTCPLDLHT
DAFYPTRISEINARLNEISNGDAPDIIRRVYAEHHERRTCVVGLDWTYDVKDLLEIAHCF
DGEALATVCRVMAQEYGQRGGGVPDLFLWRVAEENAGGEAGGSAKEKGEVKFAEVKSEND
RLSDTQRLWIHVLSGAGVKVELCAAVAKEVIQK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaatctgcgcagtccttcaaagcacaatcaaatgatcacgcagttcataaga
caccccaaatccacaaatttcgacggcgaaaacgatcggtctcccaaacgtcggcgaatc
ggtgacgtaaccaagccgccgcccacaccacgcaagaatcgcaaccatgcagatcgagtc
gccgattcagatacagaggaggaagacgttgttgtaaaagaagaagagacagatacaaag
acggacctagagagcgcattgccgcctatcgggactggcacggaggctatcaaggtatac
gaggcgttcaaggcatctcaggaagagaaaccagaaggagctgaagaccgcctgaaagat
cgaacatgggttagaggaaagagttcgctatacgttgatgcattcaatttagccctagat
acagtgctggaagaagaacaccacctgtttgatgaggccgagactgaactgttcaggata
tggagagagctgaattatgaagcacagtatctctacgtgcgactcttcctccgtaaaaca
tctgcatggcaccgcataaaaaatctcggctaccatagcgacctctcagacatggacgca
gcggttcagaccttacaacgcacgttcgacttaccagcatcatcggcagaagtcgagaca
catcctggcgagcaggaaactccaaccgatacaacgctggcaaagaccttcacgtttgca
gatcgatcggaacacgagattacgacgttagacgaagcatcttcattgctacggctagac
gagcttaaggctcttgcaaaggacgcgaaagttcaaggaaagaacaaaagagagctgttg
acagcactgcggcgggcgagcaagaagcaagccggtctggggcatgtgggcctgaaacgg
tccgacacagagagctctaggcaatccagacagtcgaggcagtcatctgtttcgggcaca
acgacaccagaagtcgaggagccgaaggcaggagatctctccgatctatctgataccgcg
aaccgcgactcccacttcactcgcaagataatgagcgaaactgggtcttgcatacggctt
tcagcagcgacgaggaagctattcgagcgtgttcaccttgtcttctaccgctcgaccgag
tggacagagaagtcactgacgacgatcattcttgcaaaaattgctcgacgcaactttcca
gagtacattgtttctcgttctgcgaacatattcgcttcacgtcccttacttttggaatac
gaagcatcaatacgaacgcaattccgaatagacagcattttagagtttaatgggaggcca
acggataaagattaccaagaagttgtggatgtgttcgaggacgtctatccacgatggcag
tcccttgttgaggaagaacaacgaaaagaggacagtgtctatcacagcggcgaaggatcc
tacctacgtcgtctatcacctgcctggatctatacccgaatcattcacaaggctatgtat
gtcgtcgcccggcgtaaagagcatatgcgcgaatacgatgtcacctccgcccttctccaa
cagcgcctctttcaccattcccgtcgcggtgcctggtaccagcgcaaagcgctccttgaa
gagcactacatggctgccctcactcctttagagaggcgtagtgaagaacagcagaagaag
cactggaagcgcaccgccctgcaaacctgcgaacgtggtctccaagacaacctcgtccat
ataatccatcactacgatctgcaaaaacgtgtcacgaaactcgagaaatcccttaacatt
cctaaacgagcccaacatgacttcacacatgtgcgcctcacaaaacccctcgagatcact
gtagaaggaacccagattttgcgcgcgcctccacttaaccgacgaaacagtagtccgcac
cctcagaattccaaccgacgcggcggtaaaacggtgtggatcgacccgcgcgagaccggc
gaatgctctgtcgaggcaatgtgtctctcgtactatcgcaatctcgggtggaaaggtttc
cacagcgaaggtgggatcgtgcggactctgttcgcctatcttttctacgacgtactcttc
acgtacgtgccaaacgtgttccaaacgcaatatcagacttgcccgctcgatttgcacaca
gacgcgttctatccgacccgcatcagcgaaattaacgcgaggctgaacgagataagtaac
ggtgacgcaccggatattataaggagagtatatgctgagcaccacgagaggcggacatgc
gtagtgggcctggattggacatatgatgttaaagacctactagagatagcacactgtttc
gacggcgaggcattggcaactgtgtgcagagtcatggcgcaggagtatggacagcgaggg
ggcggtgtacctgacctcttcctgtggagagtcgcagaagagaacgcaggtggggaggcg
ggcgggagcgcgaaggagaagggtgaagtcaagtttgcagaggtgaagagtgagaacgat
cgcttaagcgatacgcagaggctttggatacatgttctcagtggggcgggcgtaaaggtt
gagctttgcgccgctgtagccaaggaagtcattcagaaatga
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