Ascochyta rabiei: EKO05_0002142
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Entry
EKO05_0002142 CDS
T09445
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arab03021
]
EKO05_0002142
Transcription machinery [BR:
arab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
EKO05_0002142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
MurT_C
Evr1_Alr
RsdA_SigD_bd
Motif
Other DBs
NCBI-GeneID:
62220056
NCBI-ProteinID:
XP_038792813
LinkDB
All DBs
Position
3:join(1677736..1678225,1678278..1678702)
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AA seq
304 aa
AA seq
DB search
MAMDAKEIELRGKAIGKAIQENEPSASVIKLLNDLKTGVHATEDILRSTRIGVTINRLRT
HKDPAVQKLATELVSKWRDEVKKQPKKGTPAKVASATNGSASPAPASSAAASPAPSQNKQ
KHTVDPAKRNHKTDKVNYEVTGEEARDMSVRLMYDGLAHMSTELPDLIISIAKQVEAAAY
ANAGRVNEAYKTKMRSLFQNLKAKSNPGLRKRVLSGDVPPKKFVVMTHDEMKSDERRAED
EKLEKENMNQAMVAQVEKSISKEFQCGKCKQKMVSYSQAQTRSADEPMTTFCECMNCGNR
WKFS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggctatggatgccaaggagatcgagttgcggggaaaggcgatcggcaaggctatacag
gagaatgagcccagcgcatcggtgatcaaactgctgaacgacctaaagaccggcgtccac
gcgaccgaggacattctgcgatcaacgaggattggtgtcactatcaaccgtctgcgcaca
cacaaagaccccgccgtgcagaagcttgcaaccgaattggtatcgaaatggagggacgag
gtcaagaagcaacccaagaaaggtacaccagcgaaggttgcttcagcaacaaacggaagc
gcctcgcctgcgcctgcttcttcggctgctgcttcgcctgcgcccagtcaaaacaagcaa
aagcatactgtagatcctgcgaagcgcaaccacaagacggacaaagtcaactatgaggtc
actggagaggaggcgcgagacatgtctgtgcgcctcatgtacgacggtttggcgcatatg
agcaccgagttacccgacctgatcatctccatcgcaaagcaagtagaggccgccgcatac
gcaaacgccggcagagtcaacgaagcctacaagacaaagatgcgctcgctcttccaaaat
ctgaaagccaagtccaaccccgggttgcgaaagcgtgtgctgtccggggacgtaccaccc
aagaagtttgtggtcatgacgcatgacgagatgaagtctgatgagcgccgcgcagaagac
gaaaagctggagaaggagaacatgaaccaggccatggtcgcgcaggtcgagaagagtatc
tctaaggagttccagtgtggaaagtgcaagcagaagatggtctcatacagtcaggcgcag
acgaggagtgctgacgaaccgatgacgaccttctgcgaatgcatgaactgcggcaatagg
tggaagttctcgtag
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