Ascochyta rabiei: EKO05_0002520
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Entry
EKO05_0002520 CDS
T09445
Name
(RefSeq) Exosome non-catalytic core component
KO
K11600
exosome complex component RRP41
Organism
arab
Ascochyta rabiei
Pathway
arab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EKO05_0002520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arab03019
]
EKO05_0002520
Messenger RNA biogenesis [BR:
arab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
EKO05_0002520
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
EKO05_0002520
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
62211376
NCBI-ProteinID:
XP_038801119
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All DBs
Position
4:complement(307241..307996)
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AA seq
251 aa
AA seq
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MPLDTSTYSLALLRLDGRRWNELRRIHAQISTQAAADGSSYLEMGNTKILCSVTGPHEGR
SSGARGGAGGQAKLEVEINSAAFSGMDRRRNARGDKRTSEMEHCLREAFGGVVLGHLYPH
STITINLHIISQDGSLLAACINAATLALIDAGIPMTDYLVACTAASSASASAADNASADD
PLLDLNVLEEQELPFLTVGCLGESDKVAVCVMETRVRMERLEGMLAVGIEGCKRMRGILD
GVVKGYGKRFG
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcgacacaagcacctactccctggctttgttgcgtctcgacggccggcgctgg
aacgagctgcgccgtattcatgcccaaatctcgacccaagcagctgccgacggctcgtcg
tatcttgaaatgggcaacacgaagatcctctgcagcgtcacgggaccgcacgagggccga
tcgtcaggcgcacgcggcggcgcgggcggacaggcaaagctggaggtcgagatcaacagc
gcagcattcagcgggatggaccggcgacgcaatgcgcgcggcgataagcgcacgagcgag
atggagcactgtctgcgcgaggcgtttgggggtgttgtcttggggcatctgtacccgcat
tctaccatcaccatcaacctgcacatcatctcgcaggacgggtcgctgctggctgcgtgc
attaatgccgcgaccctcgcgctcatcgacgcgggtatacccatgacagattacctcgtc
gcctgcacagcggcctcgtctgcctcggcgagcgcggcagacaacgccagcgcggacgac
ccgctgctggacctcaatgtgctggaggagcaggagctgccttttctgaccgtggggtgt
ttgggcgagagcgacaaggtcgccgtctgcgtcatggagaccagagtgcgcatggagcgg
ctggagggcatgctggcagttgggatagaagggtgcaagcggatgagggggatactggat
ggcgtcgtcaaggggtatgggaagcggtttggatga
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