Ascochyta rabiei: EKO05_0002947
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Entry
EKO05_0002947 CDS
T09445
Name
(RefSeq) chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
arab
Ascochyta rabiei
Pathway
arab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EKO05_0002947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arab03019
]
EKO05_0002947
03110 Chaperones and folding catalysts [BR:
arab03110
]
EKO05_0002947
03029 Mitochondrial biogenesis [BR:
arab03029
]
EKO05_0002947
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arab04147
]
EKO05_0002947
Enzymes [BR:
arab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
EKO05_0002947
Messenger RNA biogenesis [BR:
arab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EKO05_0002947
Chaperones and folding catalysts [BR:
arab03110
]
Heat shock proteins
HSP60 / Chaperonin
EKO05_0002947
Mitochondrial biogenesis [BR:
arab03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
EKO05_0002947
Exosome [BR:
arab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EKO05_0002947
Exosomal proteins of other body fluids (saliva and urine)
EKO05_0002947
Exosomal proteins of breast cancer cells
EKO05_0002947
Exosomal proteins of colorectal cancer cells
EKO05_0002947
Exosomal proteins of bladder cancer cells
EKO05_0002947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
62211769
NCBI-ProteinID:
XP_038801512
LinkDB
All DBs
Position
4:join(1597401..1597493,1597557..1597698,1597750..1599260)
Genome browser
AA seq
581 aa
AA seq
DB search
MQRAFTARARTSALKASSRSFNLQQQRFAHKELKFGVEGRAALLKGVDTIARAVSTTLGP
KGRNVLIESSYGSPKITKDGVTVSKAITLEDKFENLGARLLQDVASKTNEVAGDGTTTAT
VLARAIFSETVKNVAAGCNPMDLRRGTQAAVEAVVEYLRANKKEITTSEEISQVATISAN
GDTHIGKLLSNAMEKVGKEGVITVKEGKTIEDELEITEGMKFDRGYISPYFITDAKSSKV
EFEKPLILLSEKKISAVQDIIPALEASQQQRRPLVIIAEDIDGEALAVCILNKLRGQLQV
AAVKAPGFGDNRKSILGDLAVLTNATVFSDDLDIKLEKATAEMLGSTGAITITKEDTIFL
NGDGSKDAVSQRCEQIRGVMADPSTSEYEKEKLQERLAKLSGGVAVIKVGGASEVEVGEK
KDRIVDALNATRAAVEEGILPGGGTGLLKASVNALKNVKAANFDQQLGITIVKNAITHPA
RKIVENAGAEGSVVVGKLTDEFGGDFNKGFNSATGEYVNMIDAGILDPFKVVRTALVDAS
GVASLLGTTEVAIVEAVEKNPSPMGGAGGNPMAGMGGMMGM
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgcagagagctttcacagcccgcgcgcggacttccgctctgaaggccagctccaggagc
ttcaacctccagcaacagagatttgcccacaaggagctcaagttcggtgtcgagggacgc
gccgccctgctcaagggtgtcgacacaatcgcccgcgctgtctcgacaacgctcggcccc
aagggtcgcaacgtcctcatcgagtccagctacggctcgcccaagatcacaaaggatggt
gtgaccgtctccaaggccatcaccctcgaggacaagttcgagaacctcggtgcgcgtctg
ctccaggatgttgcctccaagaccaacgaggtcgccggtgacggtaccacaaccgccacc
gtcctcgcccgcgccatcttctccgagaccgtcaagaacgtcgctgctggatgcaacccc
atggacctgaggcgcggaacccaggccgccgtcgaggctgttgtcgagtacctgcgcgca
aacaagaaggagatcaccaccagcgaggagatctcccaggttgccaccatctccgccaac
ggcgacacccacattggcaagctcctctccaacgccatggagaaggttggcaaggagggt
gtcatcaccgtcaaggagggcaagaccatcgaggacgagctcgagatcaccgagggaatg
aagttcgaccgcggttacatctctccctacttcattaccgacgccaagagctccaaggtc
gagttcgagaagcccttgatcctcctctccgagaagaagatctctgctgtccaggacatc
atccccgctctcgaggcctcccagcagcagcgccgcccgcttgtcatcattgctgaggac
attgacggtgaggcccttgccgtctgcattctcaacaagctgcgtggtcagctccaggtc
gccgccgtcaaggctcctggcttcggtgacaaccgcaagtccatcctcggcgaccttgcc
gtcctgacaaacgctaccgtcttcagcgacgacctcgacatcaagctcgagaaggcaacc
gccgagatgcttggttccaccggtgctatcaccatcaccaaggaggacaccatcttcctc
aacggtgacggcagcaaggacgccgtctcccagcgctgcgagcagatccgcggtgtcatg
gccgacccctccacctccgagtacgagaaggagaagcttcaggagcgtcttgccaaactc
tccggtggcgttgccgtcatcaaggtcggcggtgcctcggaggttgaggttggtgagaag
aaggaccgcatcgtcgacgccctcaacgccacccgcgctgccgtcgaggagggcatcctc
cccggtggtggcactggtctcctcaaggcttccgtcaacgctcttaagaacgtcaaggcc
gccaacttcgaccagcagcttggtatcaccattgtcaagaacgccattacccaccccgcc
cgcaagattgtcgagaacgccggtgctgagggctccgttgttgttggcaagcttaccgat
gagtttggcggcgacttcaacaagggcttcaacagcgccacaggcgagtatgtcaacatg
attgacgcgggtatcctcgatcccttcaaggtcgtccgtaccgctctcgtcgatgctagc
ggtgttgcttctcttctcggaaccaccgaggttgcgattgtcgaggccgtcgagaagaac
cccagcccgatgggcggcgcaggcggaaaccccatggccggaatgggaggtatgatggga
atgtga
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integrated database retrieval system
