Ascochyta rabiei: EKO05_0002961
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Entry
EKO05_0002961 CDS
T09445
Name
(RefSeq) protein required for normal CLN1 and CLN2 G1 cyclin expression
KO
K15176
RNA polymerase-associated protein CTR9
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arab03021
]
EKO05_0002961
Transcription machinery [BR:
arab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
EKO05_0002961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_16
TPR_8
TPR_12
TPR_7
TPR_6
TPR_11
TPR_10
TPR_Slam
ARM_TT21_N
ANAPC3
Motif
Other DBs
NCBI-GeneID:
62211785
NCBI-ProteinID:
XP_038801528
LinkDB
All DBs
Position
4:join(1646998..1649454,1649504..1650604)
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AA seq
1185 aa
AA seq
DB search
MSAVYTNGANGVNGADKMFPPPRYSDVPSAITVSVAEAGDTIDVEIALDEDIQDDPTELC
TLLETENSLKSTWVQVAVAYAKHKKLHVAIDVLSQAVNAFGRARPEDRLSILNGLCWLYL
LKCREAPRLKQDAPSDPDVKTKDFYMQAATSVLNDASRINPSYSPLFLARGVLYLLRASL
QAPATAAGPNAISPERMETLKQAAKCFEDALRTSGGKNLMAKMGKARVSYSMGRYAEALK
LYQGIMESSPDLIDPDPRIGIGCCFWQLGFKDDAASAWERSLELNPTSKVATVLLGVYNF
QLTAQLPPSDPTFGRLVKKALNEYVMPAMKMDNQFPLTCATLGSWFIIRKDFNKVEALSR
RAIELTDVNAIASDGWYQLARKEHHQENSAKAAEFYAKSDGARGGDERGYIPAKFGLAQM
NVLMNNFDGAKFRLEKILQQQPTLEAQTLLGTLYAEDVFNAQANKSTDDKSAELKKALRY
LEDVQKAWRDPKRKAIPDQSVLLNLARLYEADHPDRSLRCLEEVEQMELDAIPEEDHPQG
IEDEVELKSALRELLPPQLLNNMACFHYQAERFVRARELFQAALNACVKAASRDETIDTD
ALVTSISYNLGRTYESEGMLDEAKGVYEGLLKRHSDYIDARIRLTYISLRQSPGDAGPKA
LKQLFKDNEENVEVRALFAWYKNKSKAKTLNFGEDEEQRIHKHTLQRFDKHDRYSLMGMG
NIQLSIARELPRGSEQEKEKRRKTYERAVEFFDKVLQLDPKNAYAAQGIAIALVEDKKDF
AGALQIFSKVKETLRDYSVYVNLGHTYAEIKQYARAIENYEAALSKDRQNDPKILAYLGR
TWYMRAKHERSISAYRTALDYAKQALKLVPSDLGSQFNVAFLQFQIAQQMINLAEGQRTL
EEVNEATEGLQAAVAALDSISKAENPPFPRNDLTSRANMGRNTMANQLERARTKQTAYEN
ETTSKLEQARKLREAEMLRREEEKRRVEEAALEKKRKILEEQERIAARDRELMEMRGMDE
QRRMDEDDDREARKAERKARGPRGSGKRKKKAAAEDSATDGGLSDDEDEPRSRRRRTTAS
GTEGLSDEERPREKKKRKLQRKSEPTGKYKSAEFIDDDSDDAEAAADDTAKAATPAGDDS
ADEGVAAASRPRKGRNVVDDEDEDEDEGISAPKANGDVAMSDDDE
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgtctacaccaacggcgcgaacggcgtgaacggcgcagacaagatgttccct
ccgccgcgatactcggacgtgcccagcgccatcaccgtgtccgtcgccgaggccggagac
accatcgacgtcgagatcgcgctcgacgaggacatccaggacgaccccacggagctttgc
acgctgctggagacggagaacagtctaaagtcgacgtgggtgcaagtcgccgtcgcctat
gccaagcacaagaagctgcacgtcgccatcgacgtgctcagccaggctgtcaatgccttc
gggcgggcacgccccgaggaccgcctcagcatcctcaacggcctctgctggttgtatctg
ctcaagtgccgtgaggccccacgtctgaagcaagacgcgccctctgaccccgacgtcaag
accaaggacttctacatgcaggcagccaccagcgtcctcaacgatgcctcgcgcatcaac
ccctcgtactccccgcttttcctcgcccgcggtgtcctgtacctcctccgcgcctcgctg
caagcgcccgcgaccgccgctggcccaaacgccatcagcccagagcgtatggagacgctg
aagcaggccgcaaagtgcttcgaggatgccttgcgaacgtcaggcggaaagaacctcatg
gcgaagatgggcaaggcgcgcgtcagctattccatgggcagatatgcagaggctctgaag
ctgtatcagggcatcatggagagctcgcccgacctcatcgaccccgacccgcgcatcggc
attggctgctgcttctggcagctcggcttcaaggacgacgctgcgagcgcctgggaacga
tctctcgaactgaatccgacctcgaaagtggcaaccgtcttgctcggtgtatacaacttc
cagcttaccgcccagctcccgccttcggaccccaccttcggcaggctagtcaagaaggcg
ctgaacgaatacgtcatgcccgccatgaagatggacaatcagtttcctctgacctgcgca
actcttgggagctggttcatcatcagaaaggacttcaacaaggtcgaggcgctgtcgaga
cgtgccatcgagttgaccgatgtgaatgcgattgccagtgatggatggtaccagcttgca
aggaaagagcaccaccaggagaactcggcaaaggccgcagagttctacgccaaatctgac
ggcgctcgtggaggtgatgagcgtggctatatcccggccaaatttggcttggctcagatg
aacgtcttgatgaacaactttgatggcgctaagttccgactcgaaaagatcctccaacaa
cagccgactctagaagcacagacactgttgggcactttgtacgctgaagatgttttcaac
gcccaggccaacaagtctaccgatgacaagtctgccgagctgaaaaaggcgcttcggtac
cttgaagatgtgcaaaaagcttggagagatcccaaaaggaaggccataccggaccaatcc
gtgctgctgaaccttgctaggctttacgaagctgaccaccctgacaggagtctgaggtgt
ctcgaggaggttgagcagatggaattagacgctattccagaagaagaccatccgcaggga
atcgaagatgaggtggaattgaagtctgctcttcgcgaactgcttccacctcagctcctt
aacaacatggcttgcttccactaccaggctgagcgtttcgttcgcgccagggagctgttc
caagctgctctcaacgcctgtgtcaaggcggcctcccgcgacgagacgatcgacactgat
gcgcttgtcacatcgatcagctacaacctcggccgaacttacgagtctgagggcatgtta
gacgaggcaaagggggtttacgaaggactgcttaagcgacatagcgattacattgatgcc
cgcatccgactgacgtacatttcgctgcgccagagtcccggcgatgcgggtcccaaggca
ctcaagcagcttttcaaggacaacgaagagaatgtcgaagtccgagctctgtttgcgtgg
tacaagaacaagtcgaaggcgaagacacttaactttggagaggatgaagagcagcggata
cacaagcacacactgcaaaggttcgacaagcatgaccggtactcgctcatgggtatgggc
aatatccaactcagcatcgcccgtgagctacccagaggctctgagcaggagaaggagaag
cgccgaaaaacttatgagcgagcagtcgagttttttgacaaagtactgcagctcgatccc
aagaatgcatacgcagcacagggtatcgcaatcgctctggttgaggacaaaaaggacttt
gccggcgctctacagatcttcagcaaggtcaaggaaacactcagagactacagcgtgtac
gtgaacttgggacacacgtacgccgagatcaaacaatacgctcgtgctatcgagaattac
gaagcagcactctcaaaggataggcagaacgaccccaagatccttgcctacctcggacgt
acctggtacatgcgggcgaagcacgagcgtagtatttcagcctacaggactgcgcttgac
tacgccaaacaagcactcaaactggtgccttctgatcttggatcccagttcaacgtggct
ttcctccagttccagatcgcgcaacagatgatcaatctggcagaagggcaacgaaccctc
gaggaagtcaacgaggcgaccgagggtctacaggctgctgttgcagcgctcgacagtatt
tccaaagcagagaacccgcccttcccccgaaacgatcttacatcgcgtgccaacatgggg
cgcaacaccatggcgaaccagctcgaacgagcgcgcaccaaacagacagcttacgagaat
gagactaccagcaaactcgagcaagcccgtaagcttcgtgaagcagagatgcttcgtcgc
gaagaggagaagcgtagagttgaagaggcagctctcgagaagaagcgcaagatcctggaa
gagcaagagcgcattgcggcgcgagatcgcgagctcatggagatgcgtggcatggacgag
caaagacgcatggacgaggatgacgacagggaggcgaggaaagctgagcgcaaagcgcgt
ggtcccagaggcagcggcaagaggaagaagaaggccgcggccgaagattcagcaacagac
ggtggtctttccgatgacgaagatgagcctcgatctcgacgtcgcaggacgactgcttct
gggacagaaggcctcagcgacgaagagcggccgcgcgagaagaagaagaggaagcttcag
cgcaagagcgaacccactggcaaatacaagtctgccgagttcatcgacgacgacagcgat
gatgctgaagctgccgccgacgacactgcgaaggctgctacgcctgcaggtgacgacagc
gcagatgagggcgttgctgcggcatcgaggccacgcaagggccgcaacgtcgtggacgac
gaagacgaggacgaggacgaaggcatctcggcgccaaaggcgaatggcgatgtggccatg
tcggacgatgatgagtag
DBGET
integrated database retrieval system
