KEGG   Ascochyta rabiei: EKO05_0003048
Entry
EKO05_0003048     CDS       T09445                                 
Name
(RefSeq) tethering complex subunit
  KO
K20181  vacuolar protein sorting-associated protein 18
Organism
arab  Ascochyta rabiei
Pathway
arab04138  Autophagy - yeast
arab04142  Lysosome biogenesis
arab04145  Phagocytosis
arab04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:arab00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    EKO05_0003048
   04142 Lysosome biogenesis
    EKO05_0003048
   04138 Autophagy - yeast
    EKO05_0003048
   04148 Efferocytosis
    EKO05_0003048
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:arab04131]
    EKO05_0003048
Membrane trafficking [BR:arab04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    EKO05_0003048
   Hops complex
    EKO05_0003048
SSDB
Motif
Pfam: Pep3_Vps18 VPS18_solenoid_2nd VPS18_RING_C VPS18_solenoid_1st Clathrin zf-RING_Vps41 TPR_Vps41 zf-RING_5 zf-RING_16 zf_RING_Vps8_fungal SSNA1 zf-RING_11 zf-C3HC4_2 COG4_N DUF2175 UBL_UBAC1 zf-C3HC4 zf-rbx1 zf-RING_UBOX zf_RING_Vps8
Other DBs
NCBI-GeneID: 62211868
NCBI-ProteinID: XP_038801611
LinkDB
Position
4:complement(join(1873008..1873092,1873153..1875760,1875821..1876037))
AA seq 969 aa
MAYDTSSGYAPPSTSNAQDDASLPMFSIERVSLQFSISSDFVAAAVANNVLVLALSTGRI
LRIDLDSPADIDDIDLPKKPSEIGVIRRLFLDPSASHLIVTTTLAENYYLHTQSRTPKAL
SRLKGVVIESISWNPSQPTASTREILVGASDGNVYEVFIEPSSEFYRREERYLKSVYSTT
DGPITGLWTDIIPGRQDLRRVVIATPSTFVQFAGKIGRNAHEGSGSIFSKFFESESATVH
ELPNVSPSATSLLAVSPENQQSPDQERLNGERIFGWLTSQGVLHGKLFISQETSDLGAKV
LADSKLLPRSQIPASQTASGRARRTNDAVSSMILSQWHILQLVEGRVVVTNRLDDTIVFD
QVVLEPGQSALSLVADIKSNTYWLFTTREIFEIVVTDETRDVWKILLRSQQFEAASQFAK
TSTQKDAVATASGDYLVGKGQYLEAAAVYGRSTKPFEQVALTFIDQGEQDALRKYLLTKL
STLKKTSLMQRTMVATWLIELYMAKLNILDDTITTKAELSESMNTAETQDHLSVIRKEYQ
DFASKYKTDLDRKTAYDIISSHGREEELLYFATVVNDYNYVLSYWVQRERWQESLAVLKK
QTDPETFYKYSSVLMVQSPVELVEIMTRQSNLNAQKLIPAFLNYNNISKAPLSQNQAIRY
LLFEINQRQSTDAAIHNTLISIYASHPTTDESALLAYLEGQSLAHEQNYDADFALRLCIQ
HKRVQSCVHIYSSMGQYAQAVDLALKYEEIDLASNVADRSNTEPALRKKLWLAIAKKVIS
QSSGIKTAIEFLRRVELLRIEDLIPFFPDFVVIDDFKEEICTALEDYSRKIDELKKEMDD
SEETAQHIKSDIKALDQRYAIVEPGERCYMCGLPLLARQFFVFPCQHAFHSDCLAKKVVE
LAGIARGKRIAELQLDVSKGVSTGAKREKAIRELDALVGSSCVLCSELAVKLIDEPFISA
TDDKEEWAL
NT seq 2910 nt   +upstreamnt  +downstreamnt
atggcctacgacacctcgagcggctatgcgccgcccagcacgagcaatgcacaggacgac
gcttcactgcctatgttcagcatagagcgcgtatcgctgcaattctccatatcctcggat
tttgtagcagctgcggtagccaacaacgtccttgtcctggccctctcgactgggcgcatc
ctgcgcattgatctggacagcccagcagatatagacgacatcgatctgcccaagaagcct
tcagagattggcgtcatccggcgcctcttcctcgacccctccgcctcgcatctgatcgta
acgaccaccctcgccgagaactactatctccacacccaatcacgaacacccaaagcattg
tctcgactgaaaggcgtcgttattgaaagcatatcatggaatccttcgcagccaacagca
tcgacgcgggagatcctggtcggagcatcagacggcaacgtctacgaggtcttcatagaa
ccttcttctgagttctacaggagggaggaacgctacttgaaaagcgtatatagcactaca
gacggccccatcaccggtctgtggacggacatcatacctggaaggcaggacctgcgacgc
gttgtcattgcgactccatcaacgttcgtacaattcgcagggaagattggacggaacgca
cacgaaggcagcggctcaatcttctcaaagttctttgagagcgaatccgcgaccgtacac
gagctcccaaatgtctcgccgtcggccacgtctcttctggcagtttccccagagaatcag
caatcaccggaccaggagcgtctcaacggcgaacggatatttggatggctcacatctcaa
ggcgtattgcatggcaagctattcatatcgcaggaaacttctgaccttggggccaaggtc
ctagcggactcaaagttgctgcctagatcgcagatcccagcgtcccagactgctagtggc
cgtgcaaggagaacaaacgatgcagtgagctcgatgatccttagccagtggcatatttta
caattggtcgaaggaagggtcgtggtcacgaaccgtcttgacgataccatcgtatttgat
caagtcgttctcgagcccgggcagagcgcattaagcttggtcgctgacattaagtcgaac
acctactggctgttcactactcgtgaaatcttcgaaatcgtcgtaacagatgagaccaga
gacgtctggaagatcttgctaagatcacaacagttcgaggctgcttcgcagtttgcgaag
acatcgacacaaaaggacgccgtcgccactgcgtctggagattacctggtgggtaagggc
caatatctggaggcagccgctgtgtatggtcgaagtacaaagcccttcgagcaagtggct
ttgacgttcatcgaccaaggagaacaagatgctcttcggaaatacctgcttacaaagttg
tcaacgctcaagaagacatctctgatgcaacggaccatggtcgccacctggctcattgag
ctgtacatggccaaactcaacatccttgacgacaccatcacgactaaagctgaactctca
gagagtatgaatactgcggaaacccaggatcatctttcggtcatcagaaaagaataccag
gacttcgcatccaagtacaagacagatctcgaccgcaagacagcatacgacatcatcagc
agccatggcagagaagaagaactcttgtactttgccacggtggtcaacgactacaattac
gttctctcgtattgggtgcagcgagaacgatggcaagagtctctggctgttctcaagaag
cagactgatccagagacattctacaagtacagcagtgtgcttatggttcaatctcctgtc
gaacttgtcgagattatgacacggcagtcgaatctcaatgcccagaagcttattccagcg
ttcttgaattacaacaacatcagcaaagcccctttgagccagaaccaagctatccgttac
ctgctcttcgaaatcaatcaacgtcagtcgaccgatgctgcgatacacaacacgctcatc
tcaatctacgcatctcacccaactactgatgaatcagcactccttgcatacttggaaggg
caatcccttgcacacgagcaaaactacgacgccgattttgctctgcgtctctgcatccag
cataagcgcgtgcagtcgtgcgtgcacatctacagttctatgggtcaatacgcacaagct
gtagacctcgccctgaagtatgaggaaatcgatctcgctagcaatgtcgctgatcgctcc
aacaccgagcctgcgcttcgcaagaagctctggctcgccatcgccaagaaggttatctca
cagtcttcaggcatcaagacagcgatcgagttcctccgccgtgttgagctgctgcgcatt
gaggatttgattcctttcttccccgactttgtggtcatcgatgatttcaaggaagaaatc
tgtactgcactcgaggattacagccgtaagattgacgagctgaagaaggaaatggacgat
tccgaagaaacggcgcagcatatcaagagcgatatcaaggccctggatcagcgctatgcc
attgttgagccgggcgagcgctgctacatgtgcggactgcctttgcttgcaaggcaattc
ttcgtgttcccgtgtcagcatgcgtttcatagtgattgcttggccaaaaaggtcgtcgag
ctcgcgggcatcgcaagggggaagcggatcgccgaattacaactggatgtcagtaagggg
gtgagcacaggggcgaagagggagaaggctattcgagaattggatgcgcttgttggatcg
tcctgtgtgctttgcagcgagttggcggtcaaacttattgacgagccattcatcagtgcc
acggatgataaggaagaatgggcattgtga

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