Ascochyta rabiei: EKO05_0003143
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Entry
EKO05_0003143 CDS
T09445
Name
(RefSeq) ubiquitin fusion degradation protein
KO
K14016
ubiquitin fusion degradation protein 1
Organism
arab
Ascochyta rabiei
Pathway
arab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
EKO05_0003143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arab03009
]
EKO05_0003143
Ribosome biogenesis [BR:
arab03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
EKO05_0003143
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
62211959
NCBI-ProteinID:
XP_038801702
LinkDB
All DBs
Position
4:join(2097468..2097746,2097799..2098548)
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AA seq
342 aa
AA seq
DB search
MAAYQALRRGGPRRFDEYFRCYPIAMLPGPDRADANHGGKVFLPPSALDKLTRLHITYPM
LFELINGAQDGKKTHAGVLEFIAEEGKIYLPYWIMQTLLLEPGDLLQVKSTDIPLGTFIK
LQPQDSSFLEISDPKAVLENAFRNFACLTKGDIFTFGYNDSVYSVAVLEAKPEHPSQAVC
TIETDLSVDFAPPVGYKEPERTSGTSTPRSVMAGKGGTLHSQGTMAQAINYAAIAPSAST
AAAGAKAVSSNFLTGGHKLSKKGSKAPTPQASTPIAGQSTNPPPTVRRTNGPQPLRLAPG
KLFFGYEIKPVKNKEGADEGEQKQSKHFDGAGNTLRKKKGDK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtaccaggcgctgcgtcgtggcggtcctaggcgctttgacgagtatttccgc
tgctatcctattgccatgctgcctggcccggaccgcgcggatgcgaaccacggcggcaaa
gtgtttctaccacccagcgctctcgacaagctcacacgactacacattacataccctatg
ctcttcgagctaatcaacggtgcgcaagacggaaagaagacacatgccggtgtgctggag
ttcattgcggaggaaggcaagatctacctgccgtactggataatgcagacactcctgctt
gaacctggcgatctactacaagtcaagtccactgacatccccctcggaaccttcatcaag
ctgcagccgcaagattcgtcctttctcgagatctcagaccccaaagcggtccttgagaac
gccttccggaacttcgcatgtctgaccaagggcgacatattcacgttcggctacaacgac
agtgtgtacagtgttgccgtactcgaagctaaaccagaacaccctagccaggcggtatgc
accatagaaacggacttgtctgtcgacttcgcaccgcccgtgggctacaaggagcctgag
aggacgagtgggaccagcacgccgcgaagtgttatggctggcaagggtggaacactgcac
tctcagggcaccatggcacaggccatcaactacgccgcgattgcgccctcagcatcaact
gccgctgccggcgcgaaggctgtatcctccaacttcctcactggtggtcacaagctgtcc
aagaagggtagcaaggcaccgacaccacaagcttccacacccattgccggacagtccacg
aacccaccaccaacagtacgacgcacaaacggcccgcagccgctgcgactggcccccggc
aagctcttcttcggctacgagattaagcccgtcaagaacaaggaaggagcagacgagggc
gagcagaagcagtcgaagcacttcgatggcgcgggaaacacgctgcggaagaagaagggc
gacaaatag
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