Ascochyta rabiei: EKO05_0003165
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Entry
EKO05_0003165 CDS
T09445
Name
(RefSeq) RNase MRP subunit
KO
K14532
ribonuclease MRP protein subunit RMP1
Organism
arab
Ascochyta rabiei
Pathway
arab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EKO05_0003165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arab03009
]
EKO05_0003165
Ribosome biogenesis [BR:
arab03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
EKO05_0003165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RMP1
GMPPB_C
SCRG1
Motif
Other DBs
NCBI-GeneID:
62211980
NCBI-ProteinID:
XP_038801723
LinkDB
All DBs
Position
4:complement(join(2146944..2147184,2147235..2147539))
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AA seq
181 aa
AA seq
DB search
MGPIPTSQTTKMATPISAAPLSNASQHEKAMLIDIYELLNKLFVRNRNQHRRSHWWKSLH
AFRKQLALLLSEMETGRKSERDTKIEARLHYWDEKCVHVWYCQFSQLIAVGPFAMLGLVM
MASVARLCRITGITTAYEEIASGDIQGVLSANDELAMASEFGGVIDEEVEWDEGVVIARE
D
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgggccccatccctacctctcagaccaccaagatggctactccaatctccgccgccccg
ctgtccaatgcatcgcagcatgagaaggccatgcttattgacatctacgagctgctgaat
aagctgttcgtgcgcaaccgcaaccagcatcgccgcagccactggtggaagagcctgcac
gcgttccggaagcaactcgcccttcttctctcagaaatggagacaggcaggaagtcagag
cgcgacaccaagattgaagccaggctgcattactgggacgagaaatgcgtgcacgtgtgg
tactgccagttctcgcagctcatcgccgtaggaccattcgctatgctgggcttggtcatg
atggcgtctgttgcgcggctatgtcgcatcacgggcattacgactgcgtatgaggagatt
gcctcgggcgacatccagggtgtcctgagcgccaacgatgagctggccatggcgagcgag
tttggtggtgtcatcgatgaggaggtagagtgggacgagggcgtcgtgattgcaagagag
gactaa
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