Ascochyta rabiei: EKO05_0003229
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Entry
EKO05_0003229 CDS
T09445
Name
(RefSeq) DNA topoisomerase
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
arab
Ascochyta rabiei
Pathway
arab03440
Homologous recombination
arab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EKO05_0003229
03460 Fanconi anemia pathway
EKO05_0003229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arab03032
]
EKO05_0003229
03400 DNA repair and recombination proteins [BR:
arab03400
]
EKO05_0003229
Enzymes [BR:
arab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EKO05_0003229
DNA replication proteins [BR:
arab03032
]
Eukaryotic type
DNA Topoisomerases
EKO05_0003229
DNA repair and recombination proteins [BR:
arab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
EKO05_0003229
FA (Fanconi anemia) pathway
EKO05_0003229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Keratin_2_head
Motif
Other DBs
NCBI-GeneID:
62212676
NCBI-ProteinID:
XP_038801030
LinkDB
All DBs
Position
5:complement(join(306273..306311,306369..306494,306555..307923,307975..308153,308217..308414,308476..308553))
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AA seq
662 aa
AA seq
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MRVLCVAEKPSIAKAVANHLGGRVTTDSVRGMQWVKNYRFDFRFQQWGQCDVTFTCVAGH
IVANEFPDRYRKWHACSPSDLFDAPIQSTIAEGKKAVASNIESQARGSQILFIWTDCDRE
GEHIGTEIRDIALKVNPRLRVYRARFSNIERAHVIQASQNPIQLDDAQANAVAARIELDL
RLGAAFTRMQTLALQNLIPTHGDERGKLISYGSCQFPTLGFVVDRYLRVRSFVPEPFWYI
KVHHTKDDVEVKFNWRRGHLFDRMAVTLVFEKCLISKTAKVIKMAKKPTKKWKPLPLTTV
ELQKMGSRFLRMTSQDVMKVAEDLYTKGWISYPRTETDQFDRGMDLRNLVSRQTQDGQWG
TFAQALMSGGFNQPRNGRNNDKAHPPIHPVNYVASSALHSENERKVYEFVVRRFLACCSE
DAAGEATDIEIDYGAEIFHAHGLRVIARNYLDVYPYDKWESSQQLPHYAVGDVLEPTEAN
MFDGKTSAPSYLTEPELIALMDVNGIGTDATMAEHIAKIQEREYVIARPKGGVAANAGNG
AGRGRGRGRGGGARGGRGGAATGHDGGGGTGTGGVQEFIPTTLGVALIEGYDNVGFETSL
SKPFLRKEMEIQMKAICEGRTTRNDVVQQNLEQYRAVFNRTVQQISVLKAAITKYVVQAN
HG
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgctgtgcgtggcggagaagccgtccatcgcaaaagcggttgcaaatcacctt
ggcggccgagtgacgacggacagtgttcgcggcatgcaatgggtcaaaaactacaggttc
gactttcgtttccagcaatggggacagtgcgatgttactttcacatgcgttgcgggccat
atcgtggccaacgagttccccgaccgatataggaaatggcacgcatgttcgccttcagac
ctgtttgatgctcccatacagagtactatcgcagagggcaagaaggctgtggcaagcaac
atcgagtcgcaagccagaggctcccagattctgttcatttggaccgattgtgatcgtgaa
ggcgaacacatcggcactgagatacgagacatcgctctgaaggtgaatcctagactgcga
gtctaccgtgcacggttcagcaacatcgaaagagcacacgtcattcaagcttcgcaaaac
cccatacagctcgacgacgcccaggccaatgcagtggctgctcggattgaactcgacctg
cggcttggtgcagcgttcacacgcatgcaaacattagccctgcagaacttgatccctacc
cacggtgacgaacgcggtaagctgatcagttacgggtcctgccagttcccgactctaggt
ttcgtcgtcgaccgataccttcgtgtacgcagcttcgttccagaacctttctggtacatc
aaagtccatcataccaaggacgacgtggaggtcaagttcaactggcgacggggccacttg
ttcgatcgcatggccgtcactctggtctttgaaaagtgcttgatttcgaagactgccaaa
gtcatcaagatggcgaaaaagcccaccaagaagtggaaaccgctgcctctaacaacagtc
gagctgcagaagatgggcagtaggttccttcgtatgacgtcgcaagatgttatgaaggtc
gccgaagatctctacaccaaaggctggatcagctacccacgtaccgaaaccgatcagttc
gaccggggaatggatctccgtaacctcgtctcaaggcaaacccaggacggacagtggggt
actttcgctcaagctctaatgagcggtgggttcaatcagccacgcaatggccgcaacaac
gacaaggcacaccctcctatccaccctgtcaactatgtagcatccagcgctctccatagc
gagaatgaacgcaaggtttacgagtttgtcgttcgccgcttccttgcctgttgctccgag
gatgcagccggagaggcaaccgacattgaaatcgactatggagctgaaatcttccatgct
cacggtctgcgagtcattgcaagaaactaccttgatgtgtatccctacgacaagtgggag
agcagtcagcaattgccgcactatgcggtaggcgacgtcttggagcccacagaggcgaac
atgttcgacggcaagacttcagcacccagctacctcaccgagccggagctcatcgccttg
atggatgtcaacgggattggcacggacgcaacgatggcggagcacattgccaagattcaa
gagcgtgagtatgtcatcgcgcggcccaaaggcggggttgcagcgaacgctggcaatggc
gcaggcagaggacgcggacgaggaagaggaggtggtgctcgaggaggccgaggcggcgca
gccacgggtcatgacggaggtgggggtacaggcaccggcggagtgcaagagttcattccg
acgacgctgggtgtcgcgcttatcgaaggctacgacaatgtgggctttgagacgagtctc
agtaagcccttcttacgcaaagagatggagattcagatgaaagccatctgcgaaggccgc
acgacgcgcaacgacgtggtgcaacagaatctggaacagtaccgggccgtcttcaaccgg
actgtgcagcagatcagcgttctcaaagccgccatcaccaagtacgtggtgcaagcgaat
cacgggtga
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