Ascochyta rabiei: EKO05_0003303
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Entry
EKO05_0003303 CDS
T09445
Name
(RefSeq) Splicing factor
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arab03041
]
EKO05_0003303
03036 Chromosome and associated proteins [BR:
arab03036
]
EKO05_0003303
Spliceosome [BR:
arab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
EKO05_0003303
Chromosome and associated proteins [BR:
arab03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
EKO05_0003303
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
RRM_ACIN1
RRM_PARP14_3
HAT_Syf1_CNRKL1_N
RRM_7
HAT_PRP39_C
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
62212607
NCBI-ProteinID:
XP_059492119
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All DBs
Position
5:complement(join(497854..501241,501474..501543,501703..502063))
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AA seq
1272 aa
AA seq
DB search
MDINSLLSPSDSPAQTPPPPPAHPSPSTLAARSPGKHPVRQPLPSRTPSGLSQQITSSPQ
LHLAHQNIPSPGYAHLTNGARPVHSATSTPQPLGSPHDARMTPPSHLYRQASTPGMDALA
DLASMQQQQQATRQNSLGHQRPVTLQHLGQHLSGESVASVAMSEHSPRPRSFATRSLDQQ
HIDYLDQLDRDLIENPFNYYSHLALVTTLHQGFQNHLASIDLSPHAYELIHILRDAYRVM
SEKYPLGETLWHYRLNDEKILATNSEERMGVLELHKQATHEEPYSAKLWAAYGEYVSYLV
ACSWEQLPPEEWSEEDRLIGRELFQPQLLMDALQQGAERVKYNLQESNLVWDRYLQVLEE
DLERTGLSQEKVTRIASIYNERLGLPHATWSHTRSRYISFIQRYNLGDPEQVNEQVTQKN
THIIQQCANREDYEFKVLQAIQQGDQNAEYHAITRYLKWEKRTMGVYSFPLVNALYERAT
LRFPVDPSIWEDHVEFLIWQQNRSVDLLNVLERATRHCPWSGSLWSHRILTLEVENKAFE
DIEHVKHTATGTGLLEHSDLEEIIKVQIAWCGYLRRRAFDDPKATDDDADIAEVGIRSAL
EFVREVGMKKHGRDWAGDTKYRLERIHMKYWLQRGNVDEARNIWESLVKRQADSYDFWYR
WYIFEMVFWSQHAIRTEQNAGQQLLTPTRATAVLERAMERLQTINHPEPIVEMYMNHCEQ
HETALKVRSAVIEKRRAERMVSIRKDKEKAAAEAAAAAARPQPDDFTDVSGKRKRDDTGA
DEDATAKKSRQADSEDVSPAAVPVDGETVRASEAPSEGQSGLKRDREHTSVIVKKLPADT
TQTQIRQFFTDAGTVRNLVLKPEQDSLTAVVEFETSEEADYALSKEAKGFKGHNISIERG
ESTTLYVTNYPAHADEAYLRKHFAPFGEIIGFRFPSLKFDTHRRFCYVQFANAAQAVAAT
QLDGTDVEGLKLSVKISNPQAKKKRDGATAEGREVYVWHLNFKIKKQEVQETFAQFGHID
RINFPTLKNGNNKGFCFVVYDTKDSADAAAAEMDKKDFWGLELHVEIANDRNETKPKIRS
TLENAVSPAAPDATPGAAEAAPATAPAASFKAAPFNERSLAILNLPDTVPDVRIKPLVEK
YGFKKITLEPQHGGAVIEFTSVEGAGKAEIALQGLDFEGRKLRVGTVRDLRQQKGEWKAA
NSFVQPNRVNRPTARGGGRARGRTGFGARPAVPRAAAPMTNGEAAKSNNDFRNMILNQGG
KEAAKSEDRMEE
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggacatcaactcgctgctatcgccctcggactcgcctgcccagacgccccctccaccg
cctgcgcatccctcgccgtcgacgctggctgcccgttcgcctggcaagcaccccgtccgc
cagccgttgccctcgcgaaccccttcaggattgagccagcagatcacatcgtcgccgcaa
ctccaccttgctcaccagaacatcccttcgccgggctacgcccacctcacaaacggcgca
agacccgtccacagcgccacaagcacgcctcaacccctgggctcgccacacgatgcgcgc
atgacacccccgtcccatttgtaccggcaagcctcaacaccaggcatggatgcactggca
gatcttgcaagcatgcaacaacagcagcaagccacccggcagaactcgctcggccaccaa
cgcccagtaacattacaacaccttgggcaacatctctcaggcgagtcggtggccagcgtc
gccatgtcggaacattctccgagaccgcgcagctttgcgacaaggtctctggaccagcaa
cacatcgactacctcgaccaactggaccgggatcttatagaaaacccattcaactactac
agccatcttgccctggtcacaacgcttcaccaagggttccaaaatcaccttgcgtcgatc
gatttgagcccacatgcctatgagctcattcacatcctgcgcgacgcgtacagagtcatg
tcggaaaagtatccactcggcgaaacactttggcactatcgtctcaacgacgaaaagata
ctagcgaccaattcggaagagcgcatgggtgtgctcgagctgcacaaacaagcaacacac
gaagagccttacagcgcgaaactctgggctgcatacggcgagtacgtcagctatcttgtc
gcctgctcgtgggaacagctcccaccagaggagtggtcagaggaggacaggctcattggc
cgtgagctctttcagccgcaattgctaatggatgctctacagcaaggcgcggaaagggtc
aagtacaatctgcaagaaagcaacttggtctgggatcgctatctgcaggttctggaagag
gacctcgaacgcaccggcttgagccaggaaaaagtgacgagaattgcttccatatacaac
gaacgattaggtctgccgcatgccacatggtcacacactcgatcgagatacatctccttt
atccagcgctacaacctcggtgatcctgaacaagtgaacgagcaagtcacgcaaaagaac
acacacattatccaacagtgcgccaatcgcgaggattacgagttcaaggttctccaggcc
attcaacagggcgatcagaatgcagagtaccatgccattacccgttacctgaagtgggag
aaacggaccatgggcgtctacagcttcccgctggtcaacgcactctacgagcgcgctaca
cttcgcttccccgtcgatccttcgatatgggaggaccacgttgagtttctcatctggcaa
caaaatcgttccgtcgatttgctgaatgtgctagagcgcgctacacgacactgcccctgg
tctggatcgctttggtctcaccggatactaacgcttgaagtggagaacaaggctttcgag
gatattgagcacgtcaaacacaccgccactgggactgggttactggagcactctgacttg
gaagagatcatcaaggtccagatcgcttggtgcggttacttgcgacgacgcgctttcgac
gatcccaaggctacagatgacgacgccgacattgctgaagtgggcatacgttctgcgttg
gagtttgtaagagaggtcggtatgaaaaagcatgggcgagattgggccggcgacacaaaa
taccgactcgagcgcatccacatgaagtactggctccagcgcggcaacgttgacgaagct
cgtaatatatgggagtccctagtgaaacgccaagctgactcgtatgatttctggtaccgc
tggtacatcttcgagatggtcttttggtcccaacacgcgatacgcactgaacagaacgcc
ggccaacaattgctgacgcccacacgtgctacagccgttctggaacgtgccatggaacgc
ctgcaaacgatcaaccacccggagccgattgtggaaatgtacatgaaccattgcgagcaa
cacgagacagcgctgaaggtcaggagcgctgtaatcgaaaagagacgagcggaacgtatg
gtctcgatccggaaggacaaggagaaggcggctgctgaggcggctgcggctgcggctcgg
cctcagcccgacgatttcactgatgtttctggaaagaggaaaagggacgacacgggtgct
gatgaggatgctacggcgaagaagagcaggcaagcagactccgaagatgtgtccccagct
gcagtgccagtcgatggcgaaaccgtccgtgccagcgaggctccctctgaaggccagtca
ggtctgaagcgcgatcgggagcacacgtccgttattgttaagaaactgccagccgacacc
acgcaaacccagatcagacaattcttcacggatgctggtacagtccggaacctagtcctc
aaaccagagcaggacagtctaacagctgttgtcgagtttgagacttcagaggaggctgac
tacgctctgagcaaggaggccaagggcttcaaaggtcacaacatctcgatcgagcgcgga
gagagtacgacactctacgttaccaactacccagcccatgccgacgaagcctatctacgg
aagcacttcgctccgtttggcgagatcattggcttcaggttcccgtccctcaaattcgat
acccatcgtcgcttctgttacgtacagtttgccaacgctgcacaggcggttgctgcaact
cagctggacggtactgacgtggaaggactgaaactcagcgtgaagatctcgaatccccaa
gctaagaagaagcgcgacggcgcaactgccgaaggacgcgaggtctacgtttggcatctc
aacttcaagatcaagaagcaggaggttcaggaaacgtttgcacagttcggccacatcgac
cgcatcaactttccaaccctcaagaacggcaacaacaagggcttctgcttcgtggtgtac
gatacgaaagacagcgccgatgcggcagccgccgagatggacaagaaggacttttggggc
ctcgagctccatgttgagatcgcaaacgaccgaaacgaaaccaagccgaagatccggtcg
acgctcgagaacgcggtcagccctgcggcgcctgacgcaaccccaggtgcagcggaggca
gctccggctacagcacctgctgcgtcgttcaaggccgcgcccttcaacgagcggtctctc
gcgatcctgaacctccctgacacggtcccggacgtgcgcatcaaaccgctcgtcgaaaag
tacgggttcaagaagatcacgcttgaacctcaacacggcggggcggtgattgaattcacc
agcgttgaaggcgcaggcaaagccgagattgcgctgcaagggctcgactttgaagggcgc
aagctgcgcgtcggtacggtgcgtgatctgcgacagcaaaaaggcgagtggaaagcagcc
aacagcttcgtccaacccaaccgcgtcaaccggccgacggcgagaggcggagggcgggcg
cgcggcaggacgggctttggcgcgagacctgcggtaccccgggcagcggcgccgatgacg
aacggagaggcggccaagagcaacaacgacttccgcaacatgatcctaaaccaaggtggg
aaagaagcggccaagagcgaggataggatggaagaataa
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integrated database retrieval system
