Ascochyta rabiei: EKO05_0003357
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Entry
EKO05_0003357 CDS
T09445
Name
(RefSeq) ATP-dependent DNA helicase yku80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
arab
Ascochyta rabiei
Pathway
arab03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
EKO05_0003357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arab03400
]
EKO05_0003357
DNA repair and recombination proteins [BR:
arab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
EKO05_0003357
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_PK_bind
Ku
Ku_N
DUF3347
Motif
Other DBs
NCBI-GeneID:
62212556
NCBI-ProteinID:
XP_059492131
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All DBs
Position
5:complement(join(641587..643212,643260..643470,643675..643802,643905..644033))
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AA seq
697 aa
AA seq
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MAGKEATIYILDLGASMGEKRHGRDLTDLDWALEYVWDKITTTVATGRKTALMSVIGCRT
DESNLNGVMEEAEGYENITVFSELKHATQNKAGKPLKYDRRIIIVTDGRGEMDDGDLDDI
AMKIKDIDAPIELVLLGLDFDDTDYGYEEEDKNDAKANNEEVLKSFVESCNGNFGTLAEA
IEQLNIPRLKQTRPIPSFKGQLTLGGPADKFDATLTIDVERYPCTMLAKPPTASSFVVRT
DLGGAGPSDQSPATIVGEDHPMSDLAAVRHQRGYQIDDPNEPGIKKNVEMEELEKGYEYG
RTAVHIAESDFNVVKLETDPSLQLVGFAREEEFERYLPMSRTNYIVPQRMNQQAQLALSS
FIHALHEGGLYAVARLVTKENKPPVMVLLSPRIEPDFECLIDVELPFEEDMRRYKFPPLD
RKLTVSGKVITEHKDLPNMDLTAAMDAYVDAMDLSTFAEDEDGNADEYAKPEDTYAPLVH
RINHIVKWRSTHPNPTLTIPDPPSVLTKYSAPPADLVKHSSKALESLKMAADVKKIPLKV
KGRGKRQRSEHDKPISGLDVDALLGNPTQVNIDPENLVPSFKQALAVTDDLAAIQSAANA
MAKEIRGLVRNSVGESAYGRALEALSVMRDELTELEEPEMYNEFVREFKKELLNDTLNGD
RREMWWRVRGSRYGLIDERRSLVSDVTEKEADEFYKA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtaaggaagcgacgatatacattctcgatctgggggcatcgatgggcgagaag
cgtcatggacgtgatctcacagatctcgactgggcacttgaatatgtatgggacaagatt
acgactacagttgcgacaggcaggaagacagcgctcatgagtgtgattgggtgtcgcacg
gatgaatcaaatctgaacggtgttatggaagaagctgagggctacgaaaacatcacggtg
ttctccgagctgaaacacgcaacccaaaacaaagctggcaagccgcttaaatacgatcgc
cgaatcatcatagtgactgatgggagaggtgagatggatgatggcgatctagatgacata
gcgatgaagatcaaggatatcgatgcgccaatcgagcttgtgcttctcggcctcgacttc
gacgatacagactacggctatgaagaagaggacaagaatgacgcgaaggcgaacaacgaa
gaagtgctgaagagcttcgtcgagagttgcaatggtaattttggtactctagcagaagca
atcgagcagctcaacatcccgcgcctaaagcagacacggccgatacccagcttcaagggc
cagctcactcttggaggcccggcagataaattcgatgcaactctcactattgacgtagaa
cggtatccctgcacgatgcttgccaagccaccgacagcgagctccttcgtcgtacgaaca
gatctgggcggggccggcccaagcgatcaatctccggccaccatagttggagaagaccac
cctatgagcgacctggcggctgtgcgacatcagcgtggctaccaaatcgacgaccccaac
gaaccaggcattaagaagaatgtcgagatggaagagctagaaaagggctacgagtatggc
agaacagcagttcacatcgctgaatctgacttcaacgtcgtaaagctggaaacagatccg
tcactgcagcttgttggctttgctagggaagaggaattcgaacgctaccttcccatgagc
cgtacgaactacatcgtacctcagagaatgaaccagcaagctcagctcgcgctatcgtct
ttcatacacgctctgcacgaaggtggcctgtacgctgttgcacgcctggtcaccaaggag
aacaagcctccagtcatggttctcctgtcgccacgcatcgagccggactttgaatgtttg
atcgatgtagagttgcctttcgaggaagacatgcgacggtataagtttccgcctctagac
cgaaagcttactgtaagcgggaaggtcatcacagaacacaaggatcttcccaacatggat
ctaacagctgcaatggacgcctatgtcgatgccatggacctgtccacattcgcagaagac
gaggatggcaacgccgacgaatacgcgaagccagaagacacatatgcacccctcgtccac
cgcatcaaccatatcgtgaaatggcgctcaactcaccctaatccaaccctcaccatcccc
gacccgccctcggtacttacgaaatattctgcgccacctgcagatcttgttaagcactcc
agcaaagctcttgaatccctgaaaatggccgcagacgtaaagaagattccactcaaagtc
aaaggccgtggcaagcgtcagcgctctgagcatgataaacctatctcagggctcgatgtt
gatgcgctgttgggaaatccaacacaagtcaacatcgatcctgagaatcttgttccgagt
ttcaaacaggcacttgctgtcaccgacgacctggcggctatacagtccgctgctaatgcc
atggcgaaggagatccggggtttggtgaggaacagtgtgggtgaaagtgcttatggaagg
gcattggaagctttgagtgtgatgagagatgagcttactgagcttgaggagccggagatg
tataacgaattcgtgcgtgagttcaagaaggagctcctgaatgacacactgaatggagac
cgaagagagatgtggtggagggtcaggggaagtcggtacgggctgatcgatgagaggcga
tcccttgtcagcgacgtcacagagaaagaggcggatgagttctacaaggcgtaa
DBGET
integrated database retrieval system
