Ascochyta rabiei: EKO05_0003376
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Entry
EKO05_0003376 CDS
T09445
Name
(RefSeq) Branchpoint-bridging protein
KO
K13095
splicing factor 1
Organism
arab
Ascochyta rabiei
Pathway
arab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EKO05_0003376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arab03041
]
EKO05_0003376
Spliceosome [BR:
arab03041
]
Complex A
Other components
Complex A specific factors
EKO05_0003376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
zf-CCHC
KH_1
zf-CCHC_4
zf-CCHC_6
zf-CCHC_3
zf-CCHC_2
CCDC93_CC
Motif
Other DBs
NCBI-GeneID:
62212536
NCBI-ProteinID:
XP_038800890
LinkDB
All DBs
Position
5:join(687535..687688,687744..687948,688000..688217,688412..688635,688686..689597)
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AA seq
570 aa
AA seq
DB search
MSWRNQGITGSNNIPLGNRRRFGGDDEAGGYNPSAPAEGLSELKRGRSPERAADGPRQRK
KRNRWGDASENKAAGLMGLPTAIYSAMTTEQLDAYTLHLRIEEITQKLKINDVVPADGDR
SPSPPPQYDNFGRRVNTREFRYRKRLEDERHKLVEKAMKTLPNYHPPADYRRPTKTQEKV
YVPVNDYPEINFIGLLIGPRGNTLKKMESESGAKIAIRGKGSVKEGKGRSDAAHTSNQEE
DLHCLIMADTEEKVNKAKKLIHNVIETAASIPEGQNELKRNQLRELAALNGTLRDDENQA
CQNCGEIGHRKYDCPQKQNFTASIICRVCGQAGHMARDCPDRKVGQPWRNDNRFGGDRPQ
ARIGDAPENELDAFLSEMGGGGGGQPRGAIEYNGGGAGGDSYGGGERNLKPWERGPTGGA
APWARSDSRGERGDSNAAAPPPWAGGGAGAGAGGSYDQSGGYGNGAAPWAAAAPAAGASY
GYGNYGAGYDQSAAATGYGAPGYSAPGYGAPAAAAGPPPGLGPLFQSYGSAGSPPPPPPP
PSGSVPPPPPGDVPPPPPPSDVPPPPPPPA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggcgcaaccaaggcatcaccggttcgaacaacatcccgctcggcaaccgccga
cgattcggcggcgatgatgaagcgggaggctacaacccttctgcaccggcggaaggcttg
tctgagctgaagcgtgggcgcagcccggagcgagcggccgacggtcccagacagcgcaaa
aagcgcaaccgatggggagatgccagcgagaacaaggctgctggtctgatgggcttgccc
actgccatctactcagccatgaccacagagcagcttgatgcctacaccctgcacttgcgc
attgaagagatcacacagaagctgaagattaacgatgttgtaccggcggacggtgacaga
tctccatcaccgcctcctcagtacgacaacttcggtcgccgtgtcaacacgcgcgagttc
cgctaccgcaaacgcctcgaagacgaacgccacaagcttgttgagaaggcgatgaagacg
cttcctaactaccacccgcccgccgattacaggaggcctactaagacacaggagaaggtc
tatgtgccagtcaatgactatccggagattaacttcattggtttacttattggacctcgt
ggaaacaccctcaagaagatggagtctgagtccggcgcgaagatcgcgattcgtggcaaa
ggctctgtcaaggagggtaaaggacgatctgacgcagctcataccagcaatcaggaggag
gacctgcactgcttgatcatggcagacaccgaagagaaggtcaacaaggccaagaagctc
attcacaacgtcattgagactgccgcctctattcccgaaggacagaacgaactcaaacgc
aaccagctccgtgagcttgccgcccttaacggtactcttcgtgacgacgagaaccaagct
tgccagaactgtggtgagatcggtcaccgcaagtacgactgcccccagaagcagaacttt
actgcaagcattatttgccgtgtctgtggtcaggctggacacatggctcgtgattgtccc
gatcgcaaggttggacagccgtggcgcaacgacaaccgcttcggtggcgaccggccccag
gcccgcattggagatgctcccgagaacgagctggacgctttcttgtccgaaatgggtggt
ggcggcggcggacagccccgtggagctatcgaatacaacggcggtggtgctggcggcgac
agctatggaggtggcgagcgcaacctcaagccttgggagcgcggcccgactggcggtgct
gcaccctgggcgcgcagcgacagccgtggcgaacgtggcgacagcaatgcagctgctcct
cctccctgggctggtggtggtgctggcgccggtgccggtggctcgtacgatcagagcggc
gggtatggaaacggtgccgcaccgtgggccgctgccgctccagctgctggagcctcttac
ggctatggaaactacggagctggctacgaccagagcgctgcagcaacaggctacggtgcc
ccaggctatagtgctcccggttacggcgctcctgcggctgctgccggtcctcctcctggt
ctgggccctctgttccagtcttatggatctgctggaagcccgcctcctccacctccaccg
ccctctggctctgtacccccgccacctccgggcgatgttcctcccccgcctccgcctagc
gatgtccctcctccacctccacctccggcgtga
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