Ascochyta rabiei: EKO05_0003786
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Entry
EKO05_0003786 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K07880
Ras-related protein Rab-4B
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arab04131
]
EKO05_0003786
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arab04147
]
EKO05_0003786
04031 GTP-binding proteins [BR:
arab04031
]
EKO05_0003786
Membrane trafficking [BR:
arab04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
EKO05_0003786
Exosome [BR:
arab04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
EKO05_0003786
GTP-binding proteins [BR:
arab04031
]
Small (monomeric) G-proteins
Rab Family
Rab2/4/14 [OT]
EKO05_0003786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
ABC_tran
AAA_33
Gtr1_RagA
AAA_16
AAA_29
AAA_22
NACHT
Motif
Other DBs
NCBI-GeneID:
62212135
NCBI-ProteinID:
XP_038800489
LinkDB
All DBs
Position
5:join(1871015..1871074,1871126..1871190,1871245..1872067)
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AA seq
315 aa
AA seq
DB search
MGRNRATSIASTRSGEAPTQELGSMYDYLAKTVLLGPSGAGKSCLLHRFVRDEWRVLSSQ
TIGVEFSSKIVHIADRKSSSLSNRKRIKLQLWDTAGTERFRSVSRSYYRGAAGAILVYDV
SSWRSFEQLQTFLNDARALAGPDITIILAGNKSDVVEGGPPPAGYSYASTPSSEYALPPP
TPSSQSSLSMNLNNHYTIAPEGREVSQEAASRWASANGIPVAVEVSALNGENVEELFSRL
ARMILTKIELGEIDPDDPQSGIQYGDLGWDDGASSIRSGYPDGSVRWRGSKKKPRTEWEE
VFRLSGGTRRGGGCC
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaatcgagccacgtccattgcgtcgacgcgcagtggagaagcgcccacgcaa
gagctagggagcatgtatgactacctagccaagacggtactgctgggacctagcggtgca
ggaaaatcctgcctcctccaccgctttgtgcgcgacgaatggcgcgtcctctcctcgcag
accatcggcgtcgagttctcctccaagatcgtccacatcgccgaccgcaagtcgtcgtcg
ctctcgaaccgcaagcgcatcaagctgcagctgtgggacacggcaggcacagagcgcttt
cggtccgtcagtcgctcctactaccgcggtgctgccggcgccatcctcgtctacgatgtc
agcagctggcgcagcttcgagcaactgcagactttcctgaacgatgcccgtgccctggcc
ggtccagacatcacaatcatactggcgggcaacaagagcgacgtggtcgagggaggcccg
ccacccgcaggatacagctatgcgagcacaccaagctcagagtacgcactgccaccgcct
accccttcgagtcagtcctcgctcagcatgaacctgaacaaccactacacaatcgcaccg
gaagggagagaggtgtcgcaggaagccgcatccagatgggctagcgcgaatggaatccca
gtcgcggtcgaagtctcggcgctgaacggagaaaacgtagaggagctgttcagtcgactg
gcacggatgatattgaccaagattgagctgggcgagattgaccccgatgacccacaaagc
ggcattcagtacggcgatctggggtgggacgatggtgccagcagcatcaggagcgggtac
cccgatggctccgtcaggtggagaggaagcaagaagaagccgaggacagagtgggaggag
gtgttcaggttaagcggtgggaccagaagaggaggcggctgctgttga
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