Ascochyta rabiei: EKO05_0003840
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Entry
EKO05_0003840 CDS
T09445
Name
(RefSeq) COP9 signalosome (CSN) subunit, variant 2
KO
K24364
COP9 signalosome complex subunit 12
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arab04121
]
EKO05_0003840
Ubiquitin system [BR:
arab04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
EKO05_0003840
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Gene cluster
GFIT
Motif
Pfam:
PCI
TPR_PSMD3_N
DUF1376
Motif
Other DBs
NCBI-GeneID:
62212084
NCBI-ProteinID:
XP_038800438
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All DBs
Position
5:complement(join(2097349..2097432,2097484..2097898,2097953..2098014,2098062..2098211,2098265..2098340,2098390..2098976))
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AA seq
457 aa
AA seq
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MQAALAPFQEAHATALAQPVANFFSPVPPAQDPGRLYAFFRTSNDVQIEGDVRHVLKHNK
TTRMTQKESGAWVDIIVSYWRAVKEIIKADEASNQGRLGEQQCLAVYDAWKDLTSSFIKH
ISGGALPAWAIFTLYFTANHLRRIAIRADDHLASSKPAAVNNSFSDDVVSTVAQNQKLEE
AARVFNRIFALCLGDRNPDLSESRKWGVYCVANLQFKTYFKLKAISLSKNVVRSIEAQSD
LPPFGLYPKAHRVTYRYYTGVIAFLQEDYTKAEKNLQEAWEACHAAAEKNKSLILTYLIP
CRLITQHVVPRSPLLAESPRLERIFGPLVTCIRKGDLTGFDKALAEGEPEFVRRRIFLTL
ERSRDIALRNLLRKVYLAGGYDDLKEGQTEKDRMRKSRVPLVNFAAALRMGGQVVEDDEV
ECLLANQIFKGLMKGYISREHAMVVLNKKGAFPGTGV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccgcactcgcaccgttccaagaggctcatgcaactgcgctggcccagcctgtc
gccaacttcttcagccctgtcccgccggcgcaagaccccggccgcctgtatgccttcttc
cgcacatccaacgacgtgcagatcgagggcgatgtgcgccatgtgctcaagcacaacaag
accacccgcatgacgcagaaggagagcggagcctgggttgacatcatcgtgagctactgg
cgcgccgtgaaggagatcataaaggccgacgaggcatccaaccagggcagactgggggag
caacaatgccttgccgtgtatgatgcctggaaggacctgaccagcagcttcatcaagcac
atctcaggtggagcgctgccggcatgggccatattcaccctctacttcactgcaaaccat
ctgcgcaggatagccatcagggcggatgatcacttggccagctcgaagccggcggcggtc
aacaacagcttctcagatgacgttgtgagcacagtggcacagaatcagaagctggaggaa
gctgcacgcgtcttcaacaggatatttgctctttgcttgggtgacagaaacccagatctc
tcagagtcccgcaagtggggcgtctactgtgtagccaatcttcaattcaagacctacttc
aagctgaaagccatcagcttgtccaagaacgttgtccgatcgattgaagcccagtccgac
ttgccgcccttcggcctgtacccaaaagcgcaccgagtcacataccgctactacactgga
gtgatcgcctttctacaggaggactacacaaaggcggagaagaacttgcaagaagcctgg
gaggcttgccacgcagctgctgagaagaacaagtcactcattctcacctacctcattccc
tgccgtctcatcacacaacacgtcgtccccagatctcctcttctcgccgaatctcctcga
ctcgaacgcatattcgggccactcgtgacctgcatcagaaagggcgacctcacagggttc
gacaaggccctggcagaaggtgagcccgagttcgtccgacgacgcatcttcctcaccctc
gagcgaagccgagacatcgctctacgaaacctgctgaggaaagtatacctggctggaggc
tacgatgatctcaaggaagggcagacagaaaaagataggatgaggaagtcaagggtaccg
ctcgtgaactttgcagcagcattgaggatgggagggcaggtggtggaggacgatgaggtt
gagtgccttttggcgaaccaaatcttcaagggtctgatgaaggggtacatctcacgcgag
cacgccatggtagtcctgaacaagaagggcgcttttcccggcaccggagtttga
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