Ascochyta rabiei: EKO05_0004046
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Entry
EKO05_0004046 CDS
T09445
Name
(RefSeq) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
arab
Ascochyta rabiei
Pathway
arab03420
Nucleotide excision repair
arab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EKO05_0004046
03430 Mismatch repair
EKO05_0004046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arab03400
]
EKO05_0004046
Enzymes [BR:
arab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EKO05_0004046
DNA repair and recombination proteins [BR:
arab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EKO05_0004046
MMR (mismatch excision repair)
Other MMR factors
EKO05_0004046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
ADDB_N
AAA_11
AAA_12
SbsC_C
Pre_tape_measure
DUF6511
Motif
Other DBs
NCBI-GeneID:
62212835
NCBI-ProteinID:
XP_038799862
LinkDB
All DBs
Position
6:560732..563755
Genome browser
AA seq
1007 aa
AA seq
DB search
MDALLEGLNEAQKDAVTSPAGVLQVLAPPGSGKTKTLTARVAYHVIHERLQPWNIIVCTF
TIKAAREMKERIKGFVGEKLEAKLILGTFHSVARRFLSRYGQEIGIDKNFGITDTDDSKA
IIKRIVNRYQYMVEPGHARSRISSLKAKGVSAEDFAATKKKAEDSEFSQIYSSYQEHLKA
SNLLDYDDLLIRCVDLLRQHPSCVSTIQAVLIDEYQDTNNIQYELMKLLAQKMQRITIVG
DPDQSIYSFRAAEIKNLLRMRVDYPEAIVINLENNYRSAGSILSAALAVIEQDDSRPEKA
LIATHCVGEQPTLRHLATANVEAQWVVDEIKRTQILSAGLLTYNDYAILLRSAALSLSIE
RELGRAGIPYKMVGGKRFFDRAEIKIILSYLRVINNPDNNDAIVNVINMPSRKIGDRTIK
ALLEEAEVRKVPLWALVQDIAQSRKNPVTQLSAPAKQGITLFFRLIYTAREKLEPSQGEP
WSLLDLITHVFNQTAFEAYLKQTYKENWKDRLANVDELIAQATQMATAITNGETGVDDAL
PEVEGIAQRPDSPADVLSKFLVNVALATEVERENGEEVCQVTISTIHAAKGLEWPIVFIP
AVYNGSLPHSRADDHDEERRLLYVGMTRAKALLYLSCPMRSSGQEETKLSRFVDDSSLEK
FFSPRGPDLAFKRSTIPDIARILGRRCPESPQLAVARTLLERLEDDKYPATRNEIDGVPA
SYGTEYIGWNHDRQDANNKRRKVEALDKLRSTRVLGARVGVQDHNLIATTSFQSTNGFLS
AKDLQNVQQELQRLDQDDGNSKPTYNEVRRLGENPTQGRRPKPRAAGQGAITSFFKGAGR
TVSETPEPAPLFEERSLKRSQSSLSGLAPLNDVSNAQQPASRSRPFQPLSVPKRTLHNRP
MVGKPRRADEESDAESARHALCSSSPSKPDSKEIITLSDDDSDVQEIDKSVKAGTMSTGG
FRPASTFHTTSMSVVQNQQAQRRTLGARRTMQGWSVKHTSMPKPRQQ
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggatgcccttttggagggcctgaacgaagcgcaaaaagatgcagtcacgagccctgct
ggtgtgctccaagtgctggcgccacctggatcgggcaaaacgaagacgctgacggcgcgc
gtcgcgtatcatgttatccacgaacgtttacagccatggaacatcattgtctgcaccttc
acaatcaaggcggctcgggagatgaaggagagaatcaagggttttgttggcgaaaaactt
gaagcaaaactcattctgggcactttccattcagttgcgcgtcgattcctgtctcggtac
ggccaggaaattggcatcgacaagaacttcggtattacagacactgatgacagcaaggcg
atcatcaagcgcatcgtgaatcgctaccagtacatggtcgaaccagggcacgctcggtcc
aggatttcaagcttgaaagcgaagggcgtctcggctgaggacttcgctgcgaccaagaag
aaggctgaggatagcgaattctcccaaatatactcttcctatcaggaacacctcaaagct
tcgaatctactggattacgatgatcttctcatccgctgtgtagacttactacgacaacat
ccatcatgtgtttctaccattcaagccgtgctcatcgacgaataccaagacacaaataac
attcagtacgagctgatgaagcttctggcacagaagatgcaacggatcaccattgtagga
gacccggatcagagcatctatagcttccgtgctgccgagatcaagaatctgcttcgaatg
cgcgtagactaccctgaagctattgtcattaatctcgaaaataactaccggtctgctggt
tcgattctcagcgctgcgctcgctgtcatcgagcaggatgacagccgaccagagaaggca
cttattgccactcactgtgttggcgaacagccgacgcttcgccatcttgctactgcgaac
gttgaagcgcagtgggtcgttgacgagatcaagcgaacgcaaattctcagcgctggattg
cttacttacaacgactacgcaattctactccgctcggcagcgctctctctgtcgatcgag
cgcgaactcggacgagctggcatcccttacaagatggtgggaggcaagcgcttcttcgac
agagccgagatcaagataattctaagttatctgcgagtcattaacaaccccgacaacaat
gatgcgattgttaatgtcatcaacatgccctcccgcaagataggagaccgaacaatcaaa
gctctgctggaagaagcagaagttcgaaaggtgcctttatgggctctggtacaggatatt
gcacagagcagaaagaaccccgttacccaattatcagcaccagcgaaacagggtattaca
ctgtttttcaggctcatctacacagcgcgcgagaagcttgagccttctcaaggcgagccg
tggagccttctcgatcttatcacgcatgtcttcaatcaaacggcgttcgaggcgtatcta
aaacagacgtacaaggaaaactggaaagaccgactggccaacgttgacgaactaatcgca
caagcaacacaaatggcgactgcaatcacaaacggtgaaacaggcgtcgatgacgccttg
cctgaagtggaaggcatcgcccagcgtccagacagcccggctgatgttctctccaagttc
ctagtcaacgttgcgcttgcgaccgaggtagagagggagaacggcgaggaagtatgtcag
gtcacaatttcgacaatccacgcagctaaaggcctcgaatggcccatcgtcttcatacct
gcagtctacaatggatccctcccgcattccagagcggacgatcacgatgaggagcgaagg
ttgctatacgttggcatgacgcgtgcaaaggcgctattgtatctcagttgcccaatgcga
tcgtctggccaggaagaaaccaagctgtcgagattcgtggatgatagtagtctcgagaag
ttctttagtccgcgtggcccagatcttgcattcaaacgaagcactatacctgacatcgca
cgcatccttggcagacgctgtcctgagtcccctcagcttgctgttgctcgtacactactg
gagcgcctagaagacgacaaataccctgcaacaagaaatgagatagatggcgtaccagca
tcatacggcacagaatacatagggtggaaccatgacaggcaagatgccaacaacaaacga
agaaaagttgaggctcttgacaaattacgttcaacacgcgttctaggcgcacgtgtcggt
gttcaggaccacaacctcatagcgacgacgagctttcagtctaccaacggcttcctaagc
gccaaggacctacaaaacgtacagcaagaactacaacgacttgaccaggatgatggaaac
agcaagccgacctataacgaggtcagaagactgggcgagaatccgacacaaggcagaaga
cctaaacctcgagcagcaggccagggtgctattacaagctttttcaagggtgcaggtagg
acagtctctgaaacaccggagccagcaccactttttgaagagcgttcgctcaagcgatcg
caatcatcactgtcaggcctcgcaccgctcaatgacgtctccaacgctcagcaaccagct
tcacggtcacggccattccagccgctgtcggtacccaaacgaacgctgcacaaccggcca
atggtcggcaagcccagaagagcagatgaagagtctgatgcagagagtgcacgacatgca
ctctgctcaagctcgccctccaagccagacagcaaagagataatcactctctcggacgac
gatagtgatgtacaagagattgacaagtcggtaaaggctggaactatgtctacgggtggg
ttcaggccagcttcgaccttccacacgacatcgatgagcgtggtgcagaaccagcaagct
cagcgtagaaccctgggcgcaagaaggaccatgcagggctggagtgtgaagcatacgagc
atgccgaagccgcgacagcagtga
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