Ascochyta rabiei: EKO05_0004192
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Entry
EKO05_0004192 CDS
T09445
Name
(RefSeq) Integral membrane protein SED5
KO
K08490
syntaxin 5
Organism
arab
Ascochyta rabiei
Pathway
arab04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
EKO05_0004192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arab04131
]
EKO05_0004192
Membrane trafficking [BR:
arab04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
EKO05_0004192
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Surfac_D-trimer
DUF16
REST_helical
Syntaxin-18_N
Sec10_N
Motif
Other DBs
NCBI-GeneID:
62212976
NCBI-ProteinID:
XP_038800003
LinkDB
All DBs
Position
6:complement(join(944077..944108,944161..945154))
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AA seq
341 aa
AA seq
DB search
MAVSIQDRTDEFRSILAQAQRRQAQSKTGAQRQSLLTAQEKAQASLSPQRQRSEFARNAA
DVARGVASTMQKLERLSQLARRKTLFDDRPVEFDELTFVIKQDMTALSGQVQNLQQINSK
LHPKAKPGVDQEGEHNSNVVLLLKDKLQNVGTNFKDVLEVRTKNMQASRSRTEQFLSTAQ
SSSSLDPSRTDSPLYQTPSRGRSPGGFKNTNAAQQDLLSLEPSGSSALTRGGPQSDAQLL
LMEEAQPQNAYIQERGRAIESIESTIQELGGIFSQLAQMVSEQGEQIQRIDANTEDVVDN
VEGAQRELMKYWSRVQGNRWLVAKMFGVLMIFFLLWVLISG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctcgatccaggaccgcaccgatgagttccgctcgattctcgcccaggcccag
cgacgccaggcccagtccaagacgggagcccagcgccagtcgctgctcacagcccaggag
aaggcccaggcaagcctctcgccgcaacgacagcgctccgagtttgcacgcaatgccgcc
gacgtcgcacgcggtgtcgcaagcacaatgcagaagctggagcgcctgtcccagctggcc
cggcgcaagacgctgttcgacgaccggcccgtcgagttcgacgagctcaccttcgtcatc
aagcaagacatgacggcgctctctgggcaggtgcagaacctgcagcagatcaactcgaag
ctgcaccccaaggcgaagccaggcgtcgaccaggagggagagcacaacagcaacgtggtc
ctgctgctgaaagacaagctgcagaacgtgggcaccaacttcaaggacgtcctcgaggtg
cgaaccaagaacatgcaggcatcgcgctcgcgcacagaacaattcctctcgaccgcgcag
tcctcgtcttcccttgaccctagccggacagactccccactctaccagacaccgtcgcga
ggacgctctccaggtggcttcaagaacacaaacgccgcacagcaagacctgctctccctc
gagccctcaggctcatccgctctcacacgtggcgggccacagtcagacgcgcaactgctg
cttatggaagaggcgcagccgcagaacgcgtacatccaggagcgaggccgagcaatagaa
tcaatcgagtctacgatccaagagcttggcggcatcttcagtcagctggcgcagatggtg
tccgagcagggtgagcaaattcagcgcatcgacgccaacaccgaggacgtggttgataac
gtcgagggtgcgcagcgcgagctgatgaagtactggagccgggtgcagggcaacagatgg
cttgtcgcgaagatgttcggtgttcttatgatatttttcctcttgtgggtgctcatctct
gggtag
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integrated database retrieval system
