Ascochyta rabiei: EKO05_0004251
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Entry
EKO05_0004251 CDS
T09445
Name
(RefSeq) Rhamnogalacturonan endolyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
EKO05_0004251
Enzymes [BR:
arab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
EKO05_0004251
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
62213035
NCBI-ProteinID:
XP_038800062
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Position
6:complement(join(1099869..1100909,1100963..1101255,1101307..1101559))
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AA seq
528 aa
AA seq
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MFLKSALLAAATLSSSVLAAFGVTKSGDDFVVDAGSSNALVFTVNGKNCDITSIKYLGEE
FQYASKGSHISSGLGSATVQSAIIGTTAKITCTTSTLTHYYVVKSGESTIYMATYTTAEP
DIGELRFIARLNPNTLPSEYPFGVVSTTAGSSSAVEGSDVFVVDGQTRSKFYSSERHIDD
SRQCVYRGEDVHVCMLLNTQSYEGSSGGPFHRDINSNNAGDSTNLYFYMNSNHVQTEKYR
MGLHGPYAMAFTRSGIPSGGSSLDTSFFKDLSITGYVADSDRGKVSGTATGVGSSFQTVL
HWYNDDAQYWVYADSAGKFTSPSMKPGTYTQVLYQGEFKVKAASVTVNAGTTNTANIAAD
AETKTSVWRIGEWDGSPKGFRNAANQLRMHPSDSRMESWGSQTYTVGSSSLGNVPMALIK
GTNQLTIEFTGATGSTLRVGTTLAFAGCRPSVVVNSWTAATPAAPTKIDSRGLTRGAYRG
FGEVYDFAIPAGTLTSGSNTITITCTSGSAGDGFLAPNVILDAIELFE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcaaatctgctctcctggctgcggccaccctttcgtcttcggtgctggccgcc
ttcggtgttaccaagtctggtgacgactttgtcgtcgatgccggctcaagcaacgcgttg
gtatttacagtcaacggcaagaactgcgacatcacttcaatcaagtacctaggcgaggag
tttcagtatgcctcaaagggatcacacatttcttccggtcttggatctgccacagtccag
tctgcaatcatcggcactaccgccaaaatcacctgcacgacctcaactctaacccactat
tatgtggttaagtctggcgaatcgactatctacatggccacttacaccactgccgaacca
gacattggtgagctgcgcttcatcgctcgtctcaaccccaacacattgccttcggaatac
cccttcggtgttgtatcgaccactgctggctcgagctcggctgttgagggttcggacgtg
tttgttgtcgatggccagacccgctcgaagttttactctagcgagcggcacattgatgac
tccaggcaatgcgtctaccgtggagaagacgttcacgtttgcatgctgctcaacactcag
tcgtatgagggttcttctggtggacctttccatcgtgacatcaactcgaacaatgccggc
gactcgaccaacttgtacttctacatgaactccaatcacgtacagactgagaaatatcgc
atgggtcttcatggcccgtacgcaatggcattcactcgcagcggtatcccatccggtggc
tcatcactcgacacatctttcttcaaagacctctccatcaccggatacgtcgccgactct
gaccgtggaaaggtttcgggtactgcgactggcgttggctccagcttccaaacagttctg
cattggtacaatgatgacgcacagtactgggtgtacgccgacagcgctggcaagttcacc
tcgccttcgatgaagcccggaacatacacacaggtcctgtatcagggcgaatttaaggtc
aaggctgcaagcgtcactgtcaatgccggtacaactaacaccgctaacatcgccgccgat
gccgagaccaagacgtctgtctggcgaattggcgaatgggacggctcacctaagggcttc
agaaatgccgccaaccagctgcgtatgcatccctcggactcccgtatggagtcctggggc
tcgcagacctataccgtcggctctagtagcctaggcaatgtccccatggccctcatcaag
ggcacgaatcaactcaccatcgaatttaccggcgccactggctcaactcttcgcgtcgga
actacacttgcattcgctggctgtcgtccatcggtcgtggtaaactcatggacggctgct
acgcccgctgcgccgacaaagattgactccagaggtctcacacgtggtgcgtaccgtggg
ttcggtgaggtgtatgactttgcgatccctgctggtaccttgacaagtggatccaacacc
atcactattacttgcaccagcggaagtgccggtgacggcttcctcgcgccgaatgtcatc
ctcgatgcgatagagttgttcgagtaa
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