KEGG   Ascochyta rabiei: EKO05_0004277
Entry
EKO05_0004277     CDS       T09445                                 
Name
(RefSeq) Pre-rRNA-processing protein ipi3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
arab  Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:arab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:arab03009]
    EKO05_0004277
Ribosome biogenesis [BR:arab03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    EKO05_0004277
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_VPS8 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd NBCH_WD40 Nbas_N Beta-prop_IP5PC_F Beta-prop_LRRK2 Beta-prop_Nup120_160 Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_SCAP FtsX_ECD Gryzun-like Beta-prop_WDR35_2nd
Other DBs
NCBI-GeneID: 62213059
NCBI-ProteinID: XP_038800086
LinkDB
Position
6:join(1172827..1173165,1173221..1174504)
AA seq 540 aa
MLTEQFVAAISGSTKPNTGVTKDQGIFLHEYQPLAAQRHVFKKSATAQNGIAVSSTHIFA
AQTEKAIVHVYSREKGNQEAIVPFPERIHSIALAAQDTVLLLGAESGRVLAWEICSGRLV
STSTSHLQPVTSMVVDPSSTFFLSGSADAMIHVWALSSILSFSPDTSRSPVHTLSTHRGP
ISSIVCGHSSSTANIAVSISGDKSAIVWDYHSGQALRTYLLPETPTAVTLDPADRACFVA
YADGSLQTIDFYDDIQKTTSTDVLRDASSSHRPLQPSPKTRFNADSQKLGGALSISLSWD
GTTLVSGHTSGKVAAWDIAKSNYLSTLTNLPGPVSNLVFLRPTGFSTTTEPSFKVQTIVK
PKQDAGLTGSSSGLVPSNYNLSMQFTGRVNSPVVSATERPATKTSAFAEALTHPSFPASM
LEESLAELESWVAPSKGSNAPVASVPAPSHNVEEDSPSVSNGASQAEVQELKKQLASLQR
IQKVTFSQLSELREEKEYFVNKEKKRAERTKTKNKAGPRKSDNDVEMSDGGDDNASDMEA
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgcttaccgaacagtttgtggccgccatatctggctccacgaagccgaacacaggcgtc
accaaggaccagggcatcttcctacacgaatatcaacccttggcggcccaacgacatgtc
ttcaagaagagcgcgacggctcagaacggcattgctgtgagcagtacacacatcttcgcc
gcgcaaaccgaaaaggcgatcgtgcacgtgtacagtcgagagaagggcaaccaggaagcc
atcgtgccgtttccggagaggatacacagcattgcgctcgcggcgcaagacacagtactg
ctgctgggagctgaaagcgggagggtgctggcttgggagatctgctcaggtcgcctcgtc
tccacatccacttctcacctccagcccgtgacgtccatggttgtcgatccctcgtcgacc
ttcttcctctctggctctgcagatgctatgattcacgtatgggcactgtcttcgatcctc
tcgttctcgcccgatacctctcgttcgcccgtgcacactctgtctacgcaccgcggaccc
atctcctccatcgtgtgtggccacagctccagcaccgccaacattgcagtatcgatctcg
ggagacaagtcggcaattgtatgggactaccacagcgggcaggcgcttcgcacatatctc
ctgccagagacacctacagctgtgacgcttgaccccgccgaccgagcatgcttcgttgcg
tacgccgatggcagtctacagaccatagacttctacgatgacatccagaagaccacatcg
accgacgtcttgcgcgatgcttcatcttcacaccgacctctacagccgtcaccaaagacc
aggttcaatgctgattcgcagaaactgggaggggctctcagcatcagtctgagctgggat
gggacaacccttgtttctggccacaccagcggcaaggttgctgcctgggacattgcgaag
agcaactacctctccaccttgaccaatctgccaggacctgtatccaacctggtgttcttg
cgacctacgggcttctcaacgaccaccgagcccagcttcaaggtccagacaatcgtcaag
cccaaacaagatgctgggctgacaggcagcagcagcggcttggtcccgtcaaactacaac
ctgagcatgcagttcactggtagagtgaacagtccggtcgtttcagctacagaaaggcca
gccacaaagacaagcgcattcgcagaggctctcacgcaccccagttttcccgccagtatg
ctcgaagaaagtcttgcggagctggagtcttgggtcgcaccatccaagggtagcaacgcc
cctgtagccagcgtcccagcaccgagccacaacgtcgaggaggattcaccaagcgtatct
aatggcgcctcccaagcagaagtacaggagttgaagaagcagctcgccagcttgcagcgt
atccagaaggtcacgttttcgcagttgtcggagttgcgcgaagagaaagaatactttgtg
aataaagagaagaaaagagccgaacgcacaaagacgaagaacaaagcgggtccccgtaag
agtgacaacgatgtggaaatgagcgacggcggcgacgacaatgcttctgacatggaggcg
tag

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