Ascochyta rabiei: EKO05_0004818
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Entry
EKO05_0004818 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K12874
intron-binding protein aquarius
Organism
arab
Ascochyta rabiei
Pathway
arab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EKO05_0004818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arab03041
]
EKO05_0004818
Spliceosome [BR:
arab03041
]
Complex B
Other components
Prp19-related factors
EKO05_0004818
Complex C
EKO05_0004818
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
Aquarius_N_3rd
AAA_12
AAA_11
AAA_19
ResIII
AAA_30
AAA_16
DEAD
DnaB_C
AAA
SLFN-g3_helicase
UvrD-helicase
Parvo_NS1
NB-ARC
nSTAND3
Adeno_IVa2
Motif
Other DBs
NCBI-GeneID:
62213573
NCBI-ProteinID:
XP_038799366
LinkDB
All DBs
Position
7:complement(join(768768..769240,769296..772781,772833..773157))
Genome browser
AA seq
1427 aa
AA seq
DB search
MDDTQGAMAHARPTVADLHGESHFAQVARTNWLAAKKAPRVRPDVVKKELWDELEKAGFA
YSSLLVLENLQLLERYLWPGFTEEASNHHHLLLALMVNVKRRENLPSWVHFTSRPADFSS
FFRRILSMTVDPSQPTKLRTQLLSLVIAAFQSLDSGLVRKECAPLVGISIWHNLHSDAAR
ELHFEEHQMLRKAWRASSKRFDAADEALQARLRFERSWLYTLVLDFLDRLYNSNTKQEMG
DNLPYCERFMELLTDLQSQLPTRRYVNTLLQNLNLLPAIRLSPMYADEDNGLFRDLYTLL
AHFTFFAIEDQTGKQLSKLEYDQQHYGTLAKLQRVGYAVFQEKLQLMALANFGSIGNREE
LDGHLRTLNDDELKQLCSLMGLRTEYPSTTSLVRDRTFYMETLVSLVEQRPTFKDDVRDM
PVFPTEKILYETTFLRNESYNGERPLAIPKLNLQYLTMGDFLWRSYVLYRAESFYGIRKD
MEDVIKRVQPRGKGVSTKFGGFSRMSIPINAPGIVDVAPSKVGEEHPAYVRAEIVLDVSR
LQVPVRREWESLRPDDVVFLLTVEGKDDAPMRNGHNGASTSEQVGLSRLRCAQVVQVLDD
NGRPLRDQTKNGDYAPRARSRRLVIHIDAKQYQIDMDHVAQGRPNIYENINMIARRRGRE
NNFLPILDSIKRLTLSDIPAPSWLQEVFLGYGDPSSATYTRLPNRLQSIDFRDTFLDWQH
LVESLPGKTIEPAEDAQGAFGPPYVVQYPAVTEPEAAPARPSKKRRRDQVEVAQPAHESL
HVATYKPPNMGPYPADVIKQNAVRFTPAQVEAITSGTQPGLTVVLGPPGTGKTDVATQII
SNIYHNFPDQRTLLIAHSNQALNQLFQKIVALDIDERHLLRLGHGEEDLDTEASYSKHGR
VESFLERGTYYLSEVDRLAKNFGAPGAHGSSCETADYFNLVYVKPAWTQYWDTVTSEEAS
VEQIVAEFPLKDYFSNAPQPLFPPEADREQVLDIVQGCYRHVEKIFTELEDIRPFEILRN
PRDKANYLLIKEARIIAMTSTHAAMRRQEIASLGFHYDNVIMEEAAQITEIENFIPLALQ
NPRNGELPLQRIVLCGDHLQNSPIIQNLAFRQYANLEQSLFQRLVRLGVPTIMLDQQGRA
RPSIAELYKWRYPALTNLPAVLSAPDFQVANAGFKHEYQFINVPDYKGRGEAEPTPHWIV
NLGEAEYAVALFMYMRLLNYPAHKISILTTYAGQRGLINDILNAKCRDHPFFGRPKMVAT
VDKYQGEQNDYIILSLVRTKSIGYLRDIRRLTVALSRARLGLYILGRRSVFESVFELKPA
FDVLFTKPDELALVTGEMHGETQRPVHVEGAVDGEAIMTGYEHLEEYVRGITGAKIEALK
AGGGQLPTREVRMLDGGDEDVDREEMVLVPEEQVDHFAGDDDDEEAV
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggacgacacacagggagccatggcgcacgcccgtccgaccgtcgccgacctgcacggc
gagagccactttgcgcaggtggcgcgcaccaactggctcgccgcgaagaaggcgccccga
gtgcgcccagacgtggtcaagaaggagctgtgggacgagctcgagaaggccggctttgcc
tactcgtcgctgctcgtgctggagaacctgcagctgctggagcggtacctgtggcctggc
ttcaccgaggaggcctccaaccaccaccatctgctgctggcgctgatggtcaacgtcaag
cgcagggagaacctgccctcgtgggtccacttcacaagcaggcccgccgacttctcctcc
ttcttccgtcgcatcctgtccatgaccgtcgacccctcgcagcccacgaagctccgcacc
cagctgctctccttggtcatcgccgccttccaatcactcgacagtggtctcgtgcgcaaa
gaatgcgcgcctctggtcggcatatccatctggcacaatctgcactcggatgctgcgcgt
gagctgcactttgaggaacaccagatgctgcgcaaggcgtggcgggcgtcgtccaagcgc
ttcgacgctgcagacgaagcgctgcaggccaggctgcgcttcgagcgctcgtggttgtat
acccttgtgctggacttcttggaccgcctgtacaacagcaacacaaagcaagagatgggc
gacaacctgccctattgtgagcgcttcatggagcttctcaccgatctgcaaagccagctg
ccaacacggagatacgtaaacacgctgttgcagaacctgaacctgctcccagcaatccgt
ctctcgcccatgtacgccgatgaggacaatggcttgttccgtgacctctacaccttgctc
gctcacttcaccttcttcgcgatcgaggaccagacaggcaagcagctgtccaagctggag
tacgaccagcaacactacggcaccctcgcaaagctacaacgggtaggctacgctgtcttt
caagaaaagctacagttgatggcccttgccaactttggcagcattggaaaccgagaagag
ctggacggccacctgcgcacgttgaacgacgatgagctgaagcagctttgctctctgatg
gggctgcggacggagtacccaagcacaacctctctggtacgggaccggactttttacatg
gagaccctcgtctcgctagtcgagcagaggcccaccttcaaggacgacgtacgcgatatg
cccgtgtttcccacggaaaagatcttgtacgagaccaccttccttcgcaacgagtcttac
aacggcgagaggcctctggcgatacccaagttaaatctgcagtacctgaccatgggtgac
tttttgtggaggtcgtacgttctgtaccgcgctgaatcgttctacggtatccgaaaagat
atggaggacgtaatcaagcgcgtacagccaagaggaaagggcgtcagcacaaagtttgga
ggcttttccaggatgtctatacccatcaacgcgccgggtatcgtagatgttgctccctcc
aaggtcggtgaagaacaccccgcctatgtgagggcagagatcgttctggatgtcagtcgc
ttgcaggtccctgtccgtagggagtgggagtctttgaggccggatgacgtggtcttcctc
ctcactgtggaaggcaaagacgacgcacccatgcgcaacggtcacaatggcgcgagtaca
agcgaacaggttggtctttctaggttgaggtgcgcccaggtcgtccaagtgctggacgac
aacgggagacctttgcgggaccagacaaagaacggcgattatgcgcctcgagcacgatca
cgacgactcgttattcacatcgacgcgaagcaatatcaaatcgacatggatcacgttgcc
caaggcagacctaacatctacgagaacatcaacatgatcgcccgtcgcagggggcgagaa
aacaacttcctccccatcctcgactccatcaaacgcctcaccttgtccgatattccggcg
ccatcgtggttgcaggaagtcttcctaggctacggcgacccttcctctgcgacctacaca
cgcctgcccaatcgtttacagtcgatcgacttccgcgacactttcttggactggcaacac
ctggtcgaatccctgccaggaaagacaatagagcctgcagaagatgcacaaggagccttt
gggcccccgtacgtagtccaataccctgcagtcactgagccagaagctgctcccgctagg
ccgtccaagaagaggcgtcgcgatcaggtcgaggttgcgcagcccgcgcatgaatcgctg
catgtcgctacgtacaagcctccgaacatgggtccataccctgcagatgttatcaagcag
aacgcggtcagattcacccctgcacaggtcgaggccatcacttctggcacgcagcctggt
ctgacggtcgtgctcggcccaccaggtaccggaaagacggacgttgcgacccagatcata
tccaatatataccacaacttcccggaccaacggacgttgctcattgcgcacagcaatcag
gcgctaaaccaacttttccagaagatcgtcgcgctcgatatcgacgaacgacaccttcta
cgtctcggtcacggagaggaagacctcgatacagaagcaagctacagcaagcatggcaga
gtagagtcattcttggagagaggcacctactacctgtcagaagttgatcgacttgcgaag
aacttcggtgcgccaggtgcccatggcagctcctgtgagaccgcagactacttcaacttg
gtatatgttaagccggcttggacgcaatactgggacaccgttacctcggaggaggccagc
gttgaacagatagtcgccgagttcccactcaaggactacttttcaaatgcgccgcagccc
ttgtttccacctgaagcggaccgtgagcaagtgcttgacatcgttcaaggttgctaccgc
catgttgagaaaatcttcaccgaactcgaggacatccgtcccttcgagatcctgcggaat
ccgcgcgacaaggcgaactacctccttataaaggaggcccgcatcatcgccatgacctca
acacacgcagcgatgcgcagacaagagatcgcctctttaggcttccactacgacaacgta
atcatggaagaagccgctcagatcactgagattgagaacttcatccccctcgccctccaa
aacccccgcaatggcgaactccccctccagcgcatcgtcctctgcggtgatcatctccag
aactcgcccatcatccagaacctcgccttcagacaatacgcaaacctcgaacaatccctc
ttccagcgccttgtccgtcttggagtgcctaccataatgctcgatcaacaaggtcgcgcc
cgcccttcgattgcagaactgtacaagtggcgataccccgcgctcacgaacctccctgct
gtgctctcggcgccggacttccaggttgccaacgcaggcttcaaacacgagtaccagttc
ataaacgtgcccgactacaaggggcgcggcgaagccgagccgacaccacactggattgtc
aacctgggtgaagctgagtatgcggtcgcgctgttcatgtacatgcggttgctcaactac
ccggcacacaagatatcgatcttgactacctacgctggtcagcgggggctcatcaacgat
atcttgaacgcaaaatgtagggatcatccattctttggcagaccgaagatggtagccact
gtggacaagtaccagggcgagcaaaacgactacatcatcctctccctcgtccgcacgaaa
tccatcggctatttgcgcgacatccgccgcctgaccgtcgcgctgtctcgcgcccgtctg
ggtctgtacatcctcggccgccgctccgtcttcgagtccgtcttcgagctcaaacccgcc
ttcgacgtcctcttcaccaagcccgacgagctcgctctcgtgacgggcgaaatgcacggc
gagacacagcgccccgtgcacgtcgagggggctgtggacggcgaggctatcatgacgggg
tacgagcatttggaggagtatgtccgggggatcacgggcgcgaagatcgaggcgctcaag
gcgggcggtgggcagttgccgacccgcgaggtcaggatgctagatggtggcgatgaagac
gtggatcgcgaagagatggtgcttgttcccgaggagcaagtcgaccactttgcaggcgac
gacgatgatgaggaagcggtgtag
DBGET
integrated database retrieval system
