Ascochyta rabiei: EKO05_0004865
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Entry
EKO05_0004865 CDS
T09445
Name
(RefSeq) nuclear pore complex subunit
KO
K14309
nuclear pore complex protein Nup93
Organism
arab
Ascochyta rabiei
Pathway
arab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EKO05_0004865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arab03019
]
EKO05_0004865
Messenger RNA biogenesis [BR:
arab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EKO05_0004865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
62213618
NCBI-ProteinID:
XP_038799411
LinkDB
All DBs
Position
7:join(890258..890958,891008..893402,893453..893779)
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AA seq
1140 aa
AA seq
DB search
MSLFGNIGGTQPAASATPASTPAFGSLFGNKPTGTSAAPTTSLFGGLGGATSGATSSTTQ
PASSGGFGGSLFGGALGGAKPAASPAPASTAPTGGLFGGAAALQPQAQSSSLFGGLGGQT
QQSTAANQNSNPTQTSGLGQSSLFGATSTQQPQQPQQQGAPLSQTNTGTGRSAHFDHLLE
RGRKRNAGENGLTNFDELPSLQLGLGDIARKVRNLGAGGPSAAQAQDGTQDRAAHYLLSA
SGVKMGSTLRDLNQFSSQAGYGTNVPAQNVFDSDVDGYISNLHSQSTLALIQEGLEQSKR
DFDTFLEDNVQIEWDKQRQKIYEHFGLGRQSEEMAASQSTFGSTATARGAFGRSTRKGRS
MGLRGAATNGASTFGASSGGPPVIGHSQSILNGRDSSEKSGFGGQSGPQDRHVRDKQEKF
MDEVKNLNDARQREGPFSVLHAFSGVESATAGENSDHFISAYGALVSIVGEQTQAGAINP
GSKNPRSRSFARDYLNDTATSNTSMKMRKQILDGSRIYLEKKFLDHMEEVLKKNPSEALV
GGIPSLLNKIRGFVRAKVAFKELGADLEILQRIGDSGEEYPWVIVFYLLRGGLMTEAAEY
VREKKNFFQNNDRNFHPAISHYATDPDRRLSPDLQQKISHVHAQRTRIATTNDPYRTACY
KIIGRCEMSRRNLEPIKESMDDWVWLQFNLAREGNRAEENAGEIFGLEELRSTIRDIGQR
HFMNDDAEAAGGYGVYFYLATLAGMFEPAVNYLYQHNYVSAVHFAIALDYYGLLRVSDWS
TAGNEILTYTTKQQPQLNFGRIIGYYTGDFRAARADAAADYLVLICLNADLPGEAGKQQA
ELCYEALRELVLETREFSTLLGDVKSNGQTTPGLIQERAPLLKLSGENGLINTITREAAK
MADDNGRTNDAVLLCHLASEYDSVISILNRALSEALSVEIGQEPLRLEPLKPRLLAADGQ
QQQPIDQASTSLSMLGTDDPVDLAQKVIALYDGNNLWWRKVTELNRDTIRILFQLNEAKK
IIEGRSYMEALGMIENLRILPLSANGNVSDIRSSANSFSSYPPEIARNIGSVLLWCIGCC
SRHREHLLSGQFEDPVRKRLADQLLQKAKDLMVFAGLIRYKLPPRVFETLAREGQDVGAY
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttttcggcaatattggaggcacccagcctgctgcgagcgcgacgccagcctca
actcctgcatttggttctctcttcggcaacaagcctacaggcacgtcggccgcaccaaca
acaagcttgtttggcggtttgggtggagctacctcaggtgctacatcaagcaccacacaa
ccggcaagcagtgggggattcggaggcagcctgtttggtggcgcattgggaggagcaaaa
ccagctgcatctccagctccagcctcaacagctcctacaggaggtctctttggtggtgca
gcggcattgcaaccgcaggcgcaatcaagcagccttttcggcggccttggaggccaaacg
cagcaatcgacggccgcaaaccaaaactcgaaccccacgcaaacaagtggactcggccag
tcttctctctttggtgccacctcgacgcagcagccccagcagccccaacagcaaggtgct
cctttgtcgcaaacgaacacgggaaccggccgatcagcgcacttcgatcacttgcttgaa
aggggtcgtaagcgtaatgctggcgagaatggcctcactaacttcgatgaactaccgtcg
ctgcagctagggcttggagacatcgcccgcaaagtccgcaacctaggcgctggcggtcct
tcagcggcacaggcgcaagatggcacacaagatcgtgccgcgcactatctgctctccgcg
tctggcgtaaagatgggcagcaccctccgcgatctcaatcaattctcgtcacaagcaggc
tacggcacaaatgtaccagcgcagaacgtattcgatagcgatgtcgacggctacatctcg
aacctccactcccaatcgactcttgcgctcattcaagaaggcctggagcagtctaagcga
gacttcgatacattcctcgaggacaacgttcaaattgagtgggacaagcagcgacagaag
atttatgaacacttcggcctcggtaggcagagtgaagagatggcagcttcccaaagcacg
ttcggcagcacagcaacagcacgaggagctttcggacgatcaacacgaaagggtcgctct
atgggactcagaggcgctgcaacgaacggtgcatcgacgttcggggcatcttcaggcgga
ccgcctgttatcggccactctcagagcattcttaatgggcgggactcttccgagaagtcg
ggcttcggcgggcagtctggcccacaggatcgccatgttcgcgacaagcaggagaaattc
atggatgaggtgaagaacctcaacgatgcgaggcagcgtgagggtcctttctcagttctg
catgccttttctggcgtcgagagtgctacagctggagagaattcggatcacttcatcagc
gcatacggggctcttgtgtctattgttggcgagcaaacacaggcgggtgcgatcaatccg
ggatcaaagaaccctagatcccgaagctttgctcgggactatctgaacgacacagctaca
tcgaacacgagcatgaagatgcgtaaacaaatcctggacggatctcggatctacctcgag
aagaagttcttagatcatatggaagaagttctcaagaaaaacccgtccgaggctctggtc
ggcggtatcccttcgctgctcaacaagattcgtggcttcgttcgggctaaggtagctttc
aaggaactcggtgcagatcttgaaattcttcagaggataggtgattctggagaagaatat
ccctgggtcattgtgttttacctgctgagaggcggtttgatgacggaggctgccgaatat
gtgcgggagaagaagaacttctttcaaaataacgaccgaaacttccaccccgccatatcg
cattacgcaacagaccctgaccgcaggctcagccctgaccttcaacaaaagattagccac
gttcacgcacagcgtacccgcatcgccacgaccaacgatccttaccggacggcatgctac
aagattattggtcgctgcgagatgagccgccggaatttggagccgatcaaggaatccatg
gacgactgggtgtggctgcagttcaacttggcacgtgagggtaaccgagcagaagagaat
gctggtgagatcttcggtctcgaggagctccgttctaccatcagagatatcggtcagcgc
catttcatgaacgacgacgctgaagctgctggcggttatggggtttacttctacttggcc
acgcttgcaggaatgttcgagccagcggtcaactacttgtaccagcataactatgtctca
gcggttcatttcgcaattgccttggactattacggtctgctcagggtgtccgactggagt
accgcaggtaacgagatcctgacttacactacaaagcagcagccacaactgaacttcggg
cgaatcatcggctactacactggcgacttccgtgctgctcgagctgatgctgcagccgac
tacctggttttgatctgtctgaatgcggatctgccaggtgaagcaggcaagcagcaagca
gagctctgctatgaggcacttcgcgagcttgtcttagaaacacgcgagttctcgacgctc
ttgggcgacgtcaagtctaatggccagacaacacctggtctcatacaggagcgtgcgcca
ctgctcaagctgagtggcgagaacggtctgatcaacactatcactcgagaagcggcgaag
atggcagacgataacggccgtacgaatgacgctgtccttctttgtcacctcgctagtgaa
tatgacagcgtcatttccattctgaaccgcgctttgtcagaagctctctcagtggagatt
gggcaagagcctctacgtctggagccgctgaagccgcgactacttgctgcggatggacaa
cagcagcagccgatcgaccaagcatctacaagtttgagcatgcttggaactgatgaccca
gtcgacctggcacagaaggttattgctctttacgacggcaacaatttgtggtggcgaaaa
gtgaccgagctcaaccgcgacacaatacgtatcctgttccagctcaacgaagcaaagaag
atcattgagggacgctcatacatggaagctcttggcatgattgaaaaccttcgcattctt
cccttgtccgccaacgggaacgtgtcggacatccgctcgtcagcaaatagcttcagctcg
tacccgccagagattgcacgcaacattggcagtgtgcttttgtggtgcatcggatgctgt
tcacgacaccgcgaacatttgctctctggacagttcgaggatcctgtgcgtaagaggctg
gcagatcagctgctacagaaggccaaggacctcatggtgtttgcaggtctcatcagatac
aagcttcctccgcgagtgtttgaaaccctggcaagggagggtcaggacgttggtgcttat
tga
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integrated database retrieval system
