Ascochyta rabiei: EKO05_0004872
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Entry
EKO05_0004872 CDS
T09445
Name
(RefSeq) NET1-associated nuclear protein 1
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
arab
Ascochyta rabiei
Pathway
arab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EKO05_0004872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arab03009
]
EKO05_0004872
Ribosome biogenesis [BR:
arab03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
EKO05_0004872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
WD40
EIF3I
Beta-prop_CAF1B_HIR1
WD40_Prp19
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
Beta-prop_WDR75_2nd
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
62213625
NCBI-ProteinID:
XP_038799418
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All DBs
Position
7:complement(join(915090..916888,916939..918076))
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AA seq
978 aa
AA seq
DB search
MANSTPQLKRKREGAEAQRKKAKTQKKIEAGAGQDVEVAATPVAKSTQKPKQTPKSTPKS
KDAPNATPKPAKSNAANDDASSRTKAKKQKTKGSANWNVSSAQGGWFLPRDPVFSADEKF
IILATQKALEIYVAETSLLAYKLPVSGSGEVTAYAVSATDSNRVYVAESTGLITLWDWVS
RQKLGRWDIGATVRNMTVITHADEDLVYCHEPGKSHIVNVHALRTGAQASTTELKPILKT
SSSILDVQVLLQGKFVVVACNDSLMVGKRQKQSKTAVQDFEYVWRELKFAQRITTFNAYV
RDPTEVAGKAVKSAQDQRDVIDIAIGDDSGVILLFEDVLSSFAAIESSQKGGKTNAETLR
PKKLHWHRDAVGSVKWSLDGNYLISGGDETVITIWQLATGKPQHLPHLTAAIESIVVSPS
GSSYGVTLANNSVIVLSTTELEAKTNIVGIQSRRIEIEQLPKNADAESPPASYEIFQPVP
LVINPMNPAEAMFSVPSSQPRHRSEGLRPEPYLQTYDLANQHTISKQALTRNNATDPNLT
PEGRRILEPTVTLVQVSHDGEWLATVDEWTPPRADTSYLDEGIPEFREEERIQRREVYLK
IWRRDVQSGQWKLETRLDAPHFFQDISANGKVFDLVTDPTAPGFATVGEDHFVRVWRPKT
RLRDGLTVRGAEKQGLVTWSLDCSVEISDKLDVLDAGASSQQTLPLRNSRLAFSADGSVI
AAAISWASDEDPGVVHLIDTNTTAIQRSLTEVDVVALSGLAILDRHLIVVGDSITVWDMV
RDQLVYCVPINTPGIDRFDRIPLVKLAINEVDSTFAVSLPRFENSNARFQRASSTTQVFK
PQQLGPLWSTKNSTINLALASRHSERGYVTLDSAANIRVISPTSSTAQLPTPPPEEVPQY
ISYGQAEEAMDLEDEDGLALSAIDDILNTEESDAVVVKPEQLQQLFEESGQSHATGSLSA
LLSAVIALHQKPTSLPLR
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacagcactccacaattgaagaggaagagggaaggcgctgaggcgcaacggaag
aaggcaaagacgcaaaagaagattgaggcaggcgcgggacaggatgtggaagtcgctgct
acaccggtagccaaatcaacacagaagcctaagcagacacccaagtcaactcccaaatca
aaggatgcgcccaacgcgacaccgaagcccgccaaatcaaacgctgcgaatgacgatgct
tcatccaggacgaaagcgaagaagcaaaagaccaagggttcggcgaactggaacgtctcc
tccgcacaaggcggctggttcttgcctcgtgatcctgttttctcggccgacgagaagttc
atcattctggctacacagaaagcgcttgagatttacgtggccgagacgtcacttctggca
tacaagctccccgtgagtggctctggagaggtcaccgcatacgctgtgtctgccaccgat
tcgaacagagtctacgtcgccgagtccactggactgatcacgttgtgggactgggtatcg
agacagaaactcggacgctgggacattggcgcaactgttcgcaacatgacagtcatcaca
cacgccgacgaggacctcgtctactgccacgagccgggcaagagccatatcgtcaatgta
cacgcccttcgtacgggagctcaagcatcaaccaccgaactcaagcccatcctgaagaca
agttcgtctatcctggacgtacaggtgttgctgcaaggcaaattcgttgtcgtcgcatgc
aacgactcgctgatggtgggcaagcgccagaagcagagcaagacagctgtacaggacttt
gagtacgtttggcgcgagctcaaatttgctcagcgcatcacgaccttcaacgcctatgtt
cgcgacccgaccgaagtagcagggaaggccgtgaaatctgcccaagaccaaagagacgtc
attgacattgcgatcggcgacgattctggtgtgatacttctgtttgaagatgtcttgtca
agttttgcggctatagagagcagccagaagggaggaaagaccaacgccgagactctaagg
ccaaaaaagctacattggcacagagatgcggttgggtcagttaaatggtctctggacggc
aactatctcatctccggaggcgacgagaccgtcatcacaatctggcagcttgcaactgga
aaaccacagcacttgccccatcttacagcagcgattgagagtattgtagtctctccctca
ggctcttcctatggcgtaacgctagcaaacaactctgtcatcgtactctcaactaccgag
cttgaggccaagaccaacatcgttggcattcagtcacgccgaatcgagattgagcaactg
ccaaagaatgcggatgcagaatcaccacctgcctcttatgagatatttcagccggtgccc
ttggtcatcaacccgatgaacccagcagaggcgatgttttcagtgccttcgtcacagccg
cgtcaccgaagtgaggggctccgtcctgagccttacttgcagacgtacgatctggcgaat
cagcacaccatctcgaagcaagctctgacgcgaaacaacgcaaccgatccaaacctgaca
ccagaaggccgacggatcctcgaacccactgttaccctagtacaagtcagtcacgatggt
gagtggcttgctacagtggacgaatggacaccaccacgagccgacacttcctacctcgac
gaaggtattcctgaattcagggaagaggagcgcatccaacgccgtgaggtatacttaaag
atctggcgacgagatgtacaaagcgggcaatggaagctggagactcgattggacgcgccg
cacttctttcaagacatttctgcgaacggtaaggtcttcgacctggtcactgatcccacc
gcgccggggttcgctactgttggagaggaccattttgtgcgagtatggcgaccaaagacc
aggctgagagatggtttgactgtacgtggagcggagaagcaaggtcttgtcacttggtcg
cttgattgctcagtcgagatcagcgacaagctcgatgtcctcgacgctggtgcaagttct
cagcagacccttccacttcgtaattcgcgcttggcattctccgcggatgggtcggtcatc
gccgccgctatttcatgggcctcagatgaagaccctggagttgtccaccttatcgacacg
aacactaccgccattcaacgatctctgaccgaggtcgatgttgttgcactcagcggcctt
gcaatccttgatcgtcacctgattgtcgttggcgactcgatcacagtctgggacatggtc
cgggatcagctggtgtattgcgtgcctatcaacactcctggaatcgaccgtttcgaccgc
attccgctcgtcaagcttgctatcaacgaggttgacagcacttttgctgtgtcactaccg
cgttttgaaaacagcaacgcacgcttccagagggcttcgtccaccacgcaggtctttaag
cctcagcagctggggcctctatggtcgaccaagaattctacaatcaacctagctctggcg
tcccgtcacagcgagaggggctacgtgacccttgactcagctgcgaacattcgtgtgatc
agccccaccagtagcacggcacagctgccaacgccccctcctgaagaggtcccgcagtac
atctcgtacggccaagcagaagaggccatggacctcgaagacgaggacggcctggctttg
tcagctattgatgatattctgaacaccgaagagagtgatgcggtcgtcgttaagcccgaa
cagttgcagcaactgttcgaagagagcggccagagccatgccacaggctcgctgagcgca
ttactcagtgcagtcatagcgttacatcaaaaaccgacgtctctaccgttaagatag
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