KEGG   Ascochyta rabiei: EKO05_0004873
Entry
EKO05_0004873     CDS       T09445                                 
Name
(RefSeq) DNA-directed RNA Polymerase II subunit L, variant 2
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
arab  Ascochyta rabiei
Pathway
arab03020  RNA polymerase
arab03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:arab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EKO05_0004873
  09124 Replication and repair
   03420 Nucleotide excision repair
    EKO05_0004873
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:arab03021]
    EKO05_0004873
   03400 DNA repair and recombination proteins [BR:arab03400]
    EKO05_0004873
Transcription machinery [BR:arab03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     EKO05_0004873
  RNA polymerase III system
   RNA polymerase III
     EKO05_0004873
  RNA polymerase I system
   RNA polymerase I
     EKO05_0004873
DNA repair and recombination proteins [BR:arab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EKO05_0004873
SSDB
Motif
Pfam: RNA_pol_N Chordopox_RPO7 Mqo
Other DBs
NCBI-GeneID: 62213626
NCBI-ProteinID: XP_038799419
LinkDB
Position
7:join(918332..918367,918420..918481,918615..918807)
AA seq 96 aa
MIVPIRCFSCGKVTGDLWERYMVMLTQENKLEVEALDDLGLTRYCCRRMILTHVDLIEKL
LKYVPSADKAATAQQKREAARQQEAIASRPGANGRL
NT seq 291 nt   +upstreamnt  +downstreamnt
atgattgttcccatccgttgcttctcttgcggcaaggtcactggtgatctttgggagcgc
tacatggtcatgttgacccaggagaacaagctcgaggttgaggctctcgacgacctcggt
cttacgcgctactgctgccgccgcatgatcctcacccacgtcgatttgatcgagaagctt
ctcaagtacgtccctagcgccgacaaagccgccacagcccagcaaaagcgcgaagctgca
cggcaacaagaggccattgcgtcccggccaggggctaacggtcgtctctag

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