Ascochyta rabiei: EKO05_0005131
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Entry
EKO05_0005131 CDS
T09445
Name
(RefSeq) RNA helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
arab
Ascochyta rabiei
Pathway
arab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EKO05_0005131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arab03041
]
EKO05_0005131
03009 Ribosome biogenesis [BR:
arab03009
]
EKO05_0005131
Enzymes [BR:
arab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EKO05_0005131
Spliceosome [BR:
arab03041
]
Complex A
U1 snRNP components
U1 related factors
EKO05_0005131
Complex B
EKO05_0005131
Ribosome biogenesis [BR:
arab03009
]
Eukaryotic type
Pre-60S particles
Helicases
EKO05_0005131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
84442668
NCBI-ProteinID:
XP_059492513
LinkDB
All DBs
Position
7:complement(join(1754577..1754623,1754675..1754833,1754883..1755011,1755467..1755574,1755627..1756595,1756644..1756828,1757149..1757213))
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AA seq
553 aa
AA seq
DB search
MSYGGGYGGGGGRGGDRGYSNGGGYGGGSNGFSGGGGGGYGGGGGGYGGGGGGYGGGGGG
YGGGGAGGDRMGQLGAGLKTQQWDLESMPKFEKSFYKEDPAVTERSAEDVEAFRKEHQIA
IKGTNVPKPVTTFDEAGFPPYVINEVKAQGFDRPTPIQCQGWPMALSGRDVVGVAETGSG
KTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQQEISKFGKSSRIRNTCVYG
GVPKGPQIRDLARGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIR
KIIGQIRPDRQTCMWSATWPKEVRQLAADYQNDWIQVNIGSMDLSANHRIQQIVEVVSEF
EKRDRMAKHLETIMDDKNNKILIFTGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWV
LNEFKTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYVHRIGRTGRAGQTGTAIT
LFTTENSKQARDLVQILTESKQQIDPRLHEMCRYGGGGGGGGRWGGGRGRGGGRGGRGGW
TGGNNDPVRNNRW
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacggaggcggatacggcggcggcggcggtcgtggtggtgaccgtggctactct
aacggtggcggttacggcggcggttccaacggattctctggcggcggtggtggcggctac
ggtggtggcggcggtggttacggtggaggtggcggcggctatggcggaggtggtggtggt
tacggcggcggcggtgctggcggtgacagaatgggccagctcggcgctggtctcaagacc
cagcagtgggatctcgagtctatgcccaagttcgagaagtccttctacaaggaggaccca
gcagtcaccgaacgctcagccgaggatgttgaggcgttccgcaaggagcaccagattgct
atcaagggaaccaacgttcccaagcccgtcaccaccttcgacgaagctggtttccccccg
tacgtgatcaacgaggttaaggcccagggcttcgataggcccacacccattcagtgtcag
ggatggcccatggctctctctggacgcgatgttgtcggtgttgccgaaaccggttccgga
aagaccctcacatactgcttgcccgccatcgttcacatcaacgcccagcctcttcttgcg
cccggcgacggtccaatcgtcctgattctcgcacccacccgtgagttggccgtccagatc
cagcaggaaatcagcaaattcggaaagtcctctcgcattcgcaacacttgcgtctacgga
ggtgttcccaagggccctcagatccgtgacctcgcacgcggtgtcgaggtctgtatcgct
actcctggtcgcctcatcgacatgcttgaggctggcaagaccaacctgcgccgtgtgacc
tacctggttctcgacgaggctgaccgcatgcttgacatgggttttgagccccagatccgc
aaaatcatcggacaaattcgacctgaccgtcagacctgcatgtggtcggcaacatggccc
aaggaagtccgtcagctggctgctgactaccagaacgactggattcaggtgaacattggt
tccatggatctctctgccaaccaccgcattcagcagatcgtcgaggtcgtctcagagttc
gagaagcgtgaccgcatggccaagcacctcgagaccatcatggacgacaagaacaacaag
atcttgattttcacaggtaccaagcgtgttgctgacgagattacacgattccttcgtcaa
gacggatggcctgcgttgtctatccacggtgacaagcagcaaaatgagcgcgattgggtc
ctgaacgaattcaagaccggcaagagccccatcatggttgctactgatgtagcatcccgt
ggtatcgatgttcgcaatatcactcacgttttcaactatgactaccccaacaactcggag
gactacgttcaccgcattggtcgaactggtcgtgctggtcagaccggtactgccatcacc
ctgttcaccactgagaactccaagcaggctcgtgatctcgtccagattcttacagagtcc
aagcagcagattgatcctcgtctgcacgagatgtgccgctacggcggtggcggcggtggc
ggtggtcgctggggaggtggccgtggccgtggtggcggccgcggcggacgtggtggttgg
actggcggcaacaacgaccccgttcgcaacaaccgctggtga
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integrated database retrieval system
