Ascochyta rabiei: EKO05_0005275
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Entry
EKO05_0005275 CDS
T09445
Name
(RefSeq) cohesin complex subunit
KO
K06671
cohesin complex subunit SA-1/2
Organism
arab
Ascochyta rabiei
Pathway
arab04111
Cell cycle - yeast
arab04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
EKO05_0005275
04113 Meiosis - yeast
EKO05_0005275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arab03036
]
EKO05_0005275
Chromosome and associated proteins [BR:
arab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
EKO05_0005275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STAG
SCD
HEAT_SCC3-SA
PDS5
YL1
PRC2_EED_ins
Motif
Other DBs
NCBI-GeneID:
62214567
NCBI-ProteinID:
XP_038798296
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All DBs
Position
8:join(372647..373100,373152..376273)
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AA seq
1191 aa
AA seq
DB search
MSAAVAASEAGDAPSASARRKSGRVTKKPEKFTPGASPTGSSKRKRGDDNDNDNDNDNDS
DSGPDADETSSEEDDESTEGEPDEEELRERRRRTKGKTPAKRPAPKKAKTNGKSVTLAMR
PATGAPRKASRPRKAPVRKSILAAHETEGLYVDVFASGDRLEDITARWIARFNEHEAQAV
AEIVNFVLRAAGCSLRIDEDDIADPDNAPSRVAELQEEFQAQDVTEYPLIAKAKDGGGQA
FRHALHRFFLTLVQSIAQSGLMYEHQELLENTAVWIGAMSSSGNRPFRHTATVAALAITT
ALASAAADIVENTAKKMRQSESEANKSRVNKARVSAANQEVDDYNAKLEAVDGALNDWFS
LVYVHRYRDVDPHIRVDCVGALADWIITYPDKFFDGSHLRYLGWVLSDPNSPTRVEVLHQ
LARLFGDKDKLAGLKTFTERFRSRIVEIATRDAENNVRAAAVDLLDILREAGFLEPDDID
SVGKLIFDTDTKVRKSVVGFFAENVNAAYEAIVDDMGGQEALDEALGSPEDEEDEYQNPR
LEWLKLKCLVDQLLSYDEDDVELPTQIERISHASAELGLVAAGVESRYSLAAQALYEAVP
EMRSWEVLAGYLLYDHTQTAQNGAGDDAEAMLRQNCQLEEKHETVLLDILNAVVRLRLQR
LAVAQTDRKRTKAQRESDQEEQAEMARKLTLLIPDLLKKFGALPEAAALCLRLERELSLD
VFQELRQNAALTALLDDINKQFLTHHNERVLIEAVGSILHAQENDELKEVIRLKIQALWD
DLINTFDALRRGKDLSARGNLGENILAGVSNIVLKIAQLSKASDAAVLDQIIVPANSRSK
SKKAAPDAPPIVSILQILDRGLPSDDLDADTNEAEDTLVRHAMSLMLTYFAWKCRECLVH
IEEGTAMPDDELTTLVGRRDTCLRSLMAMLENRKGADEVRLEAANLLLDIYNMFRSLQTK
KSKLSVTPKKAQGRVSRGDEDDTSDDWEALAQDIDTPTVKILMQILTATENNLAKLANKR
LEEPDVDDDPIDPDDEPESDDEESEDTRTQEDKQVRLLMAEERLCVFGGRIVHAFLAGSL
GGEVGEAAKKRMERNKANLTPTWREVVNHLDVSRTVKKASKKAPVKPAAKAGRSEEIVIE
SDEEEEEEVEVPGDEIEDEEMADAEPDEQGNDGDENGEAGGDADEESILGD
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggcagttgcggcgtctgaggccggcgacgccccctcggcgagcgcgcgacgc
aagtccggacgcgtgacgaagaagcccgaaaagttcacgccgggcgccagtcccacggga
agcagcaagaggaagcgtggcgacgacaacgacaacgacaacgacaacgacaacgacagc
gacagcggaccagacgcggacgaaacatcgtcggaagaggacgacgagagcaccgagggc
gagccagacgaagaggaactgagggagcggcggcgcaggaccaagggcaaaacgcctgca
aaacgccccgcgccgaagaaggcaaagaccaatggaaagagcgtcacgctggcgatgcgc
cccgccacaggcgcgcccaggaaagcaagccggccgcgcaaagcacctgtgcgcaagagc
attctggctgcacacgagacggaagggctctacgtcgacgtctttgccagcggcgaccgc
ctcgaggacatcacggcgcgctggatcgcgcgattcaacgagcacgaggcgcaagccgtc
gccgagattgtcaacttcgtactgcgcgccgccggttgcagcctgcgcatcgacgaagac
gacatcgccgacccggacaacgcgccgagtcgcgtcgcagagctccaggaagagttccag
gcgcaagacgtgaccgaatatccgctcatcgccaaagcaaaggacggcggcggccaggcg
ttcagacacgccttgcaccgcttcttcctcacgctcgtccagagcatcgcccagtccgga
ctcatgtacgagcaccaggagctgctcgagaacacggccgtctggattggcgccatgtcc
tcgagtggcaaccggcccttccggcacacggctacagtcgcagcattggccattaccaca
gcgctcgcctcggcagccgcagacattgtcgaaaacacagcgaaaaagatgcggcaaagc
gagtctgaagcgaacaagtcgcgcgtcaacaaagctcgtgtctctgcagcaaaccaggag
gtcgacgactacaacgcgaagctcgaggccgtcgacggcgcactcaatgactggttcagt
ctggtgtacgtccaccgataccgcgacgtggacccccacatcagagtggactgcgttgga
gcgctggcagactggatcatcacatacccagacaagttcttcgacggcagccatctgcgc
taccttggctgggtcctctcagatccaaactcacctacacgcgtcgaggtgctgcaccag
ctggcgaggctgttcggtgacaaagacaagctcgctggactgaagacgtttacagaacgc
ttccgatcccgaatcgttgaaattgcgactcgagacgctgagaacaatgtgcgtgccgcg
gctgtcgacctgctagatatcctgcgtgaggctggcttcctcgagccagacgacattgac
tcggtcggcaagctcatcttcgataccgataccaaggtgcgcaagtcggtcgtgggcttc
tttgctgagaacgtcaacgctgcctacgaggccattgtcgacgatatgggaggccaagaa
gctctcgacgaagcgttgggatcaccagaggacgaagaagatgagtatcagaaccctcga
ctggagtggctgaagctcaagtgtctcgttgaccagcttctatcgtatgatgaggacgac
gtagagctaccaactcagattgagcgcatctcacatgcaagtgcagaactagggttggtc
gctgctggtgtcgagtcgcggtactcactagctgctcaggcgctgtacgaggccgttcct
gagatgagatcgtgggaagtgttggcgggttaccttctctacgatcacacacaaacggca
cagaacggcgccggcgatgatgcagaggccatgttacgacaaaactgccagcttgaggag
aagcacgagaccgtactactggacatcttgaacgctgtcgttcgtcttcggttgcagcgt
cttgcagtagcacagacagacagaaagaggacgaaagctcagcgcgagagcgaccaggaa
gagcaggcagagatggcgaggaaactcacattgctcatccccgatctgctgaagaagttt
ggtgcgctgcccgaggctgcagcactgtgtctccgtcttgagcgtgagctcagtctggat
gtcttccaagagctgcgacagaacgcagccttgaccgcattactggacgatatcaacaag
cagttcctgacacaccacaacgagcgcgtcctaatagaagctgttggctccatattgcat
gctcaggagaatgacgagctcaaggaagtaatccgcctcaagatccaagcgttgtgggat
gatctgatcaacacgttcgacgcactccggcgcggcaaagatctttcagcacgaggtaac
ctcggtgaaaacatcctagccggtgtttcgaacattgtcttgaagattgcgcagctgagc
aaggcttctgatgctgcggtgctcgaccagattattgtgcctgccaactcgagaagcaaa
tccaagaaggctgccccggacgcaccgccaattgtatccatcttacagatattagaccgc
ggcctgccctcggacgatctagacgccgacacaaacgaagccgaggacacgctcgtccgc
cacgctatgtcactgatgctcacatactttgcgtggaagtgtcgggaatgcttggttcat
atcgaagagggcacggcgatgccggatgacgagctcaccaccctggtcgggcgacgggat
acgtgcttacgatctctcatggccatgcttgagaatcgcaagggcgccgacgaggtgcgt
ctcgaggctgccaacctgcttcttgatatctacaacatgttccgctcgcttcagaccaag
aagtcgaagctcagcgtcacgccaaagaaggcacaaggccgtgtctccagaggggatgag
gatgacacgagcgacgactgggaagctctcgctcaagacatcgataccccgactgtcaag
atcctgatgcagatcctcaccgcaacggagaacaacctcgccaagctcgccaacaagcgt
cttgaagagcccgacgtggacgatgatcccattgaccctgacgacgagcccgagtcggac
gatgaagaatcagaagacacacgcactcaagaagacaagcaggtccgccttctcatggcg
gaagagcgtctctgcgtgtttggtgggcgcattgtgcacgccttcctagcgggcagcttg
ggtggtgaggtgggcgaggcggccaagaagcggatggagaggaacaaggcaaacttgacg
ccgacgtggagggaggtcgtcaaccacctcgatgtatccaggactgtgaagaaggcgagc
aagaaggcacccgtcaagccagcggcgaaggcgggcaggagcgaggagattgtaattgag
agcgacgaggaagaggaagaagaggtggaggtgcccggtgacgagatcgaggatgaggag
atggcggatgcggagccggacgagcaaggcaatgatggcgatgagaatggtgaggctgga
ggagatgctgacgaagagagcatcctcggtgactga
DBGET
integrated database retrieval system