Ascochyta rabiei: EKO05_0005276
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Entry
EKO05_0005276 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K10609
cullin 4
Organism
arab
Ascochyta rabiei
Pathway
arab03420
Nucleotide excision repair
arab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
EKO05_0005276
09124 Replication and repair
03420 Nucleotide excision repair
EKO05_0005276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arab04121
]
EKO05_0005276
03400 DNA repair and recombination proteins [BR:
arab03400
]
EKO05_0005276
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arab04147
]
EKO05_0005276
Ubiquitin system [BR:
arab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
EKO05_0005276
DNA repair and recombination proteins [BR:
arab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
EKO05_0005276
TCR (transcription coupled repair) factors
Cul4-CSA complex
EKO05_0005276
Exosome [BR:
arab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
EKO05_0005276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
PDDEXK_7
Motif
Other DBs
NCBI-GeneID:
62214568
NCBI-ProteinID:
XP_038798297
LinkDB
All DBs
Position
8:join(376817..378665,378718..379140,379192..379613)
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AA seq
897 aa
AA seq
DB search
MSSADAGTLKRKHSVSTQQKLSFTAQQKPSSTATAPLSPTSKRSRRESSPREAATPVTTS
TTSTTSTAATTATTATTATTGTMSTADMYSFPSKRASAVHGKDVVDMTSSPDNSPAKPRN
GMLRKTGPNMGVHAAPKRLMVKNFKPTRKVDPKAFLDQTWHKIEGALDTIFRQGDIDFSL
EELYRGVENLCRQNMAREVKERLVNKCNEYVGGALKTKVKDSLGRANVDVLRATLHAWST
WHDQTQYLDWIFCYLDRSYLLPRHESLRDTSIGLFRSLIFEHAKLNPRIVDGACDLVAAD
RTGGDLDSDMFKKTVDMLHDMHVYTQHFEPRLLELSQEYVVKWADVESEQRSLSEYVRSA
RALMDREMQRADLYRLPNTTKRDLLTLLEDHLVSRKEERLVNQDEFADLLEANAIEDLEL
LYSLLERRRLGNKLRPGFSKWIEDEGTAIVFNEKEQENMVVQLLTLKRQLDTFWKVSFHR
NDEMGHGLRESFETFMNKTKKTSASWGTDNSKTGEMIAKYVDMLLRGGAKAIPAQLSRRA
STKVEVAEAEDDNEEAIFDEDTEVNNQLDQVLDLFRFVHGKAVFEAFYKKDLARRLLMGR
SASADAERSMLSRLKNECGAGFTANLEQMFRDIELSREEMASYKMICEERGQKQSLDLNV
SILSASSWPTYPTVPVIIPSEIKSAIDKFEAHYKSKHSGRKLELKHALAHCQIKAKFPNG
NKELVVSSFQAIVLLLFNGRPTDEHIDYHYLKEATGLPPAELNRTLQSLACAKLRPLTKH
PKGRDINATDTFTLNATFTDAKYRIKINTVQLKETAAENKETHERVAADRNYETQAAIVR
ILKARKRISHAELVAETIKATRNRGTLEVSGIKRNIDRLIEKEFLEREDDGLYAYIA
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgccgacgctggcacgctgaaacggaagcactcggtttccacccagcagaaa
ctgtccttcactgcccagcagaagccgagctcgaccgccaccgctccgctctctccaacc
agcaaacgcagccgccgcgagagctccccccgggaagccgccacacccgtcaccaccagc
accaccagcaccaccagcaccgcagccaccacagccaccacagccaccacagccaccacc
ggcactatgagtaccgccgacatgtacagcttcccgagcaagcgtgcgagcgcagtgcat
ggcaaagacgtggtggacatgacctccagccccgataacagcccagcgaagccccgcaat
ggcatgctgcgcaagacggggccgaacatgggcgtccatgccgcacccaagcggctgatg
gtcaagaacttcaagcccacgcgcaaagtcgaccccaaggccttcctcgaccagacctgg
cacaagatcgagggcgcgctcgacaccatcttcaggcaaggcgacatcgacttcagcctt
gaggagctgtaccgcggcgtcgagaatctgtgccgccagaacatggcacgtgaggtcaag
gagaggctcgtcaacaagtgcaacgagtatgtgggcggagcgctgaagacaaaggtcaag
gacagcttgggtcgagccaacgtcgacgtcctgcgcgcaacgctacacgcctggagtacc
tggcacgaccagacccagtatctcgactggatcttctgctacctcgaccggtcgtacctg
ctccctcgccacgagtctctccgcgatacttcaatcggcctcttccgctccctcatcttc
gaacacgccaagctcaacccacgcatcgtcgacggcgcatgtgatctggtcgctgccgat
cgaacgggcggcgacctggacagtgacatgttcaagaagaccgtcgacatgttgcacgac
atgcacgtctacacacaacactttgagccgcggctgctcgagctcagtcaggagtatgtc
gtgaagtgggcggacgtggaaagcgagcagaggtcgttgtctgaatacgtccgaagtgca
agggcgcttatggaccgtgagatgcagagggcagacctctaccggctgcccaataccaca
aagcgtgatctccttaccctgttggaggaccacctcgtctcgagaaaggaggagaggctg
gtcaaccaagacgagtttgcggatctcttggaagcgaatgccattgaagatcttgagcta
ctgtattcgctgcttgagcgacgtagactgggtaacaagctacggccaggtttctccaag
tggatcgaagacgaaggcacggccattgtgttcaacgagaaggagcaggagaacatggtc
gttcagcttctgactctcaaacgacaattggacactttctggaaagtgtccttccatcgt
aatgacgaaatgggccacggcctgcgcgaatccttcgagaccttcatgaacaagacgaag
aagacaagtgcaagttggggcacagacaactccaagacgggcgaaatgatcgccaagtac
gtcgacatgctgctgcgagggggcgcgaaggccatccctgcgcagctgagccggagggcg
tccaccaaggtcgaggtagccgaggccgaggacgacaacgaggaggccattttcgatgaa
gataccgaggtcaataaccagctagatcaagtcctcgatctgttccggtttgttcatggc
aaggcggtgttcgaagctttctacaagaaggacttggcaaggcgtttgttgatgggcagg
agtgcgagtgcagacgcagagaggagtatgctgtcaagacttaagaacgaatgcggtgcg
ggcttcacagccaacctggagcagatgttccgcgatatcgagctttcacgtgaagagatg
gcctcttacaagatgatctgtgaagaacgcggacagaagcagagtctcgacctgaatgtc
agcattctctccgcatcctcctggcctacgtaccccacagttcctgtcattataccttcg
gagatcaagtctgccattgacaagttcgaagcacactacaaatccaagcactctggccgc
aagcttgaactcaagcatgccctcgcacactgtcagatcaaggccaagtttcccaacggt
aacaaggagttggtagtatcctccttccaagccattgtccttctcctcttcaacggcagg
ccaaccgacgaacacatcgactaccactacctcaaagaagccaccggcttgcccccggca
gaactaaaccgcacgctccagtccctcgcctgcgcgaaactccgcccactgaccaagcac
cccaagggccgggacatcaatgccaccgacacattcacgctcaacgcgacctttaccgat
gccaagtaccgcatcaagatcaacacggtgcagctcaaggagacggccgctgagaacaaa
gaaacccacgagcgcgttgcggcagatcgcaactacgagacgcaggcagccattgtgcgc
atcctcaaggcgcggaagcgcatcagccatgccgagctggtggccgagacgatcaaggcc
acgaggaatcgtggcacgttggaggtgagcgggatcaagcgcaacattgatcgcttgatt
gagaaggagtttctggagcgcgaggacgatgggttgtatgcttatattgcgtag
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integrated database retrieval system
