Ascochyta rabiei: EKO05_0005447
Help
Entry
EKO05_0005447 CDS
T09445
Name
(RefSeq) Vacuolar protein sorting-associated protein 16
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
arab
Ascochyta rabiei
Pathway
arab04138
Autophagy - yeast
arab04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
EKO05_0005447
04148 Efferocytosis
EKO05_0005447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arab04131
]
EKO05_0005447
Membrane trafficking [BR:
arab04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
EKO05_0005447
Hops complex
EKO05_0005447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_Vps41
TERF2_RBM
Motif
Other DBs
NCBI-GeneID:
62214731
NCBI-ProteinID:
XP_038798460
LinkDB
All DBs
Position
8:complement(join(1510578..1512719,1512768..1512896,1512954..1513060,1513130..1513268))
Genome browser
AA seq
838 aa
AA seq
DB search
MSKPTANWEKVGDKFYRKVQLYTAVFDQDLELEKYNVVGAPYSGAVAVYRDEEKLHTYRG
PGVAKSSIDVYSCAGKLIRSINWDKGIIKGLGWSEDEKLLVVTEDGTVRCYYDLQGDFAP
FTLGHDSDQHGVVSCRFYTTGFVALLGNNHLISVASYAEPRPKLLAIPPTEPVVSWNIIP
PAYSLSRSVEVILAIGSTLYVVDATEAEDRNFDAGPFKHISVSPRGEFLAFYTEDGKVWV
VSGDWSEKLSEYDSRVKTVPKDMQWCGSNAVALAWEDEVHLIGPKSAATKFYYDTWVHLL
PDVDGIRLLTNDVCEFIQKVPNETVEVFRLGSDSPAANLLEASSLLEQKSPKADDLIQLI
RPNLAEAVDACIKAAAHEYNIHWQKSLLKAASYGKSVLDLYSSDDFVDTCDTLRVLNAVR
FYKIGLPLSYDQYRRMTPEKLVERLTNRNEYLLALRVADYLHLPASQIHGHWAQQKVRVS
TDPEEEICSLIVKKLHGKPGVSFEEIARAAYDEGRIRLATSLLDHEPRAGKQVPLLLSMK
EDTIALDKAIESGDTDLIFHVLLHLRKKLPLASFFRVINSRPVATALVESSARDQDTDLL
KDLYYQDDRRLDGSALLLSSALAQPSLAQSLDKLKLASKYLSDSRDAPAVFTRTAIDEAQ
RLLQLQAQFEKDLSNARDIPNQSTTGTSLIGLSANDTIFNLIKLGHQKRAQKIVSEFKIP
DKTYTWLRLRALVAARHFIEIEEWAKQKKNPIGWEPFFNEVLAAGNARVASIFIPKCTSL
TVSERVDMWVKCGLLVKAGEEAHKAKDRELLLSLRDKASGSASVEIERLLGMLPQGRR
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagccaaccgccaactgggaaaaggtcggcgacaagttctaccgcaaggtccag
ctgtacacggccgtgttcgaccaggacctcgagctcgagaagtacaacgtggtcggggct
ccgtacagcggcgcagtagccgtctaccgcgatgaagagaagctgcacacgtacagaggg
cccggggtcgccaagtcgagcatcgacgtgtacagctgcgccggcaagctaattcgcagc
atcaattgggacaagggcatcatcaagggccttggctggtcagaggacgagaagctgctg
gtcgtcaccgaggacggcacggtgcgctgctactacgacctccagggcgacttcgcaccc
ttcacgctgggccatgattcggaccagcacggcgttgtctcctgccgcttctacaccacc
ggcttcgttgcgctgctcggcaacaaccacctcatctcggtcgcctcgtacgcggagccg
cgcccgaagctgctcgccataccgcccacggagcccgtcgtgtcgtggaacatcataccg
cctgcgtactcgctctcccgctccgtcgaagtcattctcgccattggcagcaccctgtac
gtcgtggatgcgaccgaggccgaggaccgcaacttcgatgctggcccgttcaagcacatc
agcgtcagcccgcgcggcgagtttctcgccttctacacagaagacggcaaggtctgggtg
gtgagtggcgattggagcgagaagctcagcgagtatgacagccgcgtcaagacggtgccc
aaggatatgcaatggtgtggatccaatgctgtcgccctggcctgggaagacgaggtgcat
ctgataggtccgaagagcgcagccaccaagttctactacgacacctgggtacacttgctg
ccggacgttgatggtatacggctgctgaccaacgatgtgtgcgaattcatccaaaaagtc
cctaacgagactgtcgaggtatttcgccttggatcggactcgcctgccgcaaatctactc
gaagcctcctcgctgctggagcaaaagagccccaaggcagacgatctcatccagctgatt
cggcctaatctggctgaggcggtagacgcgtgcatcaaagctgcggcgcacgagtacaac
atccactggcagaagtcgctgctcaaagctgcgtcgtacggcaagtcggtgctcgatctc
tactcatcagacgactttgtagacacgtgcgacacgctgcgagtcctgaatgctgtgcgc
ttttataagattggactacctctcagctacgaccagtaccgacgaatgacgcccgagaag
ctggtcgagcgcctcacaaaccgcaatgaatatctccttgcgctgcgagttgccgattat
ctacacctcccagcgagccagatccacggtcactgggcacagcagaaagtgcgcgtctct
acggaccccgaggaagaaatctgcagtctcatcgtcaagaagctccatggcaaacctggc
gtctctttcgaagagatagcccgcgccgcctacgacgaaggacgcatccgtctcgcaacc
tcgctcctcgaccacgagccacgagcaggtaaacaagtgcctcttctcttgagcatgaag
gaagacaccattgcgcttgacaaagccatcgagtccggcgacacagatctcatcttccac
gtactgctgcacctgcgcaagaaactccccctcgcatcgttcttccgtgtcatcaacagc
cggcccgtcgccaccgcgctggtcgagtcttccgcccgggaccaagacaccgacctgctg
aaagacctctactaccaagatgaccgacgcctcgatggctctgccctcctcctttcgtct
gcgctcgcccaaccctctctagctcagtctctcgacaaactgaaactcgcctccaagtac
ctgtccgactcgcgcgacgcccccgctgtgttcacacgcaccgccatcgacgaagcccaa
cgcttgctccagctccaggcgcagttcgaaaaggacctgtccaacgcgcgagacatcccc
aaccaatccacaaccggtaccagcctcatcggcctaagtgcgaacgatacgatcttcaat
ctgatcaaactgggtcaccagaagcgcgcgcagaagatcgtaagcgagttcaaaatcccg
gacaagacgtacacatggcttcgcctacgcgcgctcgttgccgcgagacatttcatcgag
atcgaggagtgggccaagcagaaaaagaatccgatcgggtgggagccgttcttcaacgag
gtgttggccgccggaaacgcaagagtggcgtccatcttcatacccaagtgcacgagcttg
acggtcagtgagcgagtggatatgtgggtcaagtgcgggttgctagtcaaggctggagaa
gaggcgcataaggcgaaggatagggagttgttgttgagtctgagggacaaggcgagtggc
agtgcgtcggtggagattgaaagattgcttggaatgctaccgcaggggagacgctga
DBGET
integrated database retrieval system
