KEGG   Ascochyta rabiei: EKO05_0005534
Entry
EKO05_0005534     CDS       T09445                                 
Name
(RefSeq) RING-type E3 ubiquitin transferase
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
arab  Ascochyta rabiei
Pathway
arab03040  Spliceosome
arab04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:arab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EKO05_0005534
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    EKO05_0005534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:arab03041]
    EKO05_0005534
   04121 Ubiquitin system [BR:arab04121]
    EKO05_0005534
   03400 DNA repair and recombination proteins [BR:arab03400]
    EKO05_0005534
Enzymes [BR:arab01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     EKO05_0005534
Spliceosome [BR:arab03041]
 Complex B
  Other components
   Prp19 complex
    EKO05_0005534
 Complex C
   Prp19-CDC5 complex
    EKO05_0005534
Ubiquitin system [BR:arab04121]
 Ubiquitin ligases (E3)
  U-box type E3
   EKO05_0005534
DNA repair and recombination proteins [BR:arab03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    EKO05_0005534
SSDB
Motif
Pfam: WD40_Prp19 Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_EML_2 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st EIF3I WDR55 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_Vps41 B-prop_COPA_B_2nd Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_EML Beta-prop_ACSF4 WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_Aladin eIF2A KNTC1_N Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st Beta-prop_CAF1B_HIR1 Cytochrom_D1 Beta-prop_SCAP Beta-prop_RSE1_2nd Beta-prop_RIG_2nd Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_2nd V_ATPase_I_N Beta-prop_WDR19_2nd Beta-prop_At4g14310 U-box DUF3450 Lactonase
Other DBs
NCBI-GeneID: 62214817
NCBI-ProteinID: XP_038798546
LinkDB
Position
8:join(1725065..1725558,1725607..1726534)
AA seq 473 aa
MLCAISGEAPREAVASRKSGNVFEKRLIEAHIAENHTDPVTGEDLAVEDLIELKSPQVVA
PRPPNLTSIPALLSAFQNEWDAIVLETHTLKQQLAQTRQELSTALYQNDAATRVVARLTR
ERDEAREALSNVTISGGGSNGDAMQVDGQALPEELVAKVDETQQQLFATRRKRPVPEGWA
TGEDISTFDVTSSSEPLYAGSSAVSVDESGDLALFGGADGVAGVYSTSQQKVVQVLKAGS
PVTATTWWGSRAVVATAAGTVKIFEDGNEIAQLGSHAGAITSLSLHPSGSILASGAADKR
VAYYDLSTFKTVSQIYTEADITSCSFHVDGLLFFVGSSDGKVRIFDVKTGAPMAELDTGA
PVAAISFSENGTWFAVAQKGSSQVSVWDIRKQNVIKVLEAGSPVENVKWDYTGQFLAAAG
SGSISVQQYTKSSKSWSEPVRKAVPAKDVAWGANAGSLVALTSEGGLSILSSA
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgctttgcgccatatctggagaagctccacgagaagctgttgcgtcgcgcaagagcggc
aatgttttcgaaaagcgcctgatcgaggctcacattgccgaaaaccacaccgaccctgta
acaggcgaagacctcgcagtcgaggacctcatcgaactcaaatcgccgcaagtcgttgcg
ccccgtccaccgaacctcacatcgatacccgctctcctgagcgccttccagaacgagtgg
gatgccatcgtactcgagacacacacgctcaagcagcaactggcgcagacacgacaggag
ctcagcacagcgctttaccagaacgatgctgcgactcgcgtggttgcgaggttgacgcgc
gagcgggacgaggcacgagaggcgctatcgaacgtcaccatcagcggcggtggcagcaac
ggtgatgctatgcaggttgatggtcaagcgctgcccgaggagcttgtcgccaaggttgat
gagacacagcaacagctctttgcgacgcgccgaaagcgacctgtacctgagggctgggct
acaggcgaggacatttccacattcgacgttacctcctcgagcgagcctctatacgccgga
agcagcgcggtctctgtcgatgaatcgggcgacttggcactttttggcggagcagatggc
gttgcgggcgtctactcaacgtcccagcagaaggtggtgcaggtgctcaaggctggtagc
cccgtcactgctacaacgtggtggggatcgcgtgcagttgttgccactgcggctgggaca
gtcaagatcttcgaagatggcaacgagatcgcgcagcttggctcgcatgctggtgcaatt
acatcgctctctctccaccccagtggatctatcttggcgtccggagccgcggataagcgt
gtggcttactacgacctttcgacattcaagaccgtctcccaaatttacactgaagcggac
attacatcctgctccttccacgtcgacggtctcctcttcttcgtgggtagctcggacggc
aaggtccgcatctttgatgtcaagaccggcgctccaatggctgagctcgacaccggcgcg
cctgtcgccgctatttccttctctgagaacggcacttggtttgcggttgcccagaagggg
tcgagccaggtttctgtctgggacatcaggaagcagaatgttatcaaggttcttgaagct
ggcagccctgtcgagaacgtcaagtgggactacactggccagttcctggccgctgccggc
tcgggcagcatctcggtgcagcagtacaccaaatcgtcaaagagctggtctgagccagta
cgcaaggccgtaccggccaaggacgttgcttggggcgcgaatgcaggaagcttggttgct
ctgacatcagagggtggattgagcatcttgagctcggcatga

DBGET integrated database retrieval system