Ascochyta rabiei: EKO05_0005563
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Entry
EKO05_0005563 CDS
T09445
Name
(RefSeq) Cytoplasmic GTPase/eEF2-like protein (ribosomal biogenesis)
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
arab
Ascochyta rabiei
Pathway
arab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EKO05_0005563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arab03009
]
EKO05_0005563
Ribosome biogenesis [BR:
arab03009
]
Eukaryotic type
Pre-60S particles
GTPases
EKO05_0005563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
EFG_IV
Motif
Other DBs
NCBI-GeneID:
62214848
NCBI-ProteinID:
XP_038798577
LinkDB
All DBs
Position
8:join(1809359..1809421,1809483..1810450,1810537..1812066,1812114..1812813)
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AA seq
1086 aa
AA seq
DB search
MPTIPSDQLVKLQQQAEGIRNICILAHVDHGKTSLTDALIATNGIISPKLAGKIRYLDSR
PDEQLRGITMESSAISLYFSLLRRSAPDAQPERKEFLINLIDSPGHIDFSYEVSTASRLC
DGAIVLVDAVEGVCSQTVTVLRQAWIEKLKPLLVINKMDRLITEWKMTPADAHTHLNKLV
EQVNAVMGSFYQGERMEDDLRWREKMEERLNAAAAEKTNTTPSAVAEAGDSIDTTTTPAE
YEEKDDEDIYFAPEKNNVIFASAIDGWAFTVKQFASLYERKLGIKRSVLEKVLWGDYFLD
PKTKRVLSSKHLKGRHLKPMFVQLVLENIWAIYDATTGGNNGKGDPAMVEKITKSLNITL
PPHVLRSRDPRAILTALFAAWLPLSTALLVSVTEYLPSPTKAQAERMPEIIDTSVGADHV
APEVRKAITHFDTSKDAPVVAYVSKMFSVPESELPQHKRRAGALTAEEARDLGRKKRAEL
ARQQAIAHGETSDLGNSTDALSSTAIGEDEANAEEAAPTDEKAEHLIGFARIYSGTLSVG
DEVYVLGPKFSPANPHAEPAPKKVTVTALYLMMGRGLESLTSVPAGVVFGIGGLEGQMLK
SGTLCSQLPGSLNLAGVTMGSEPIVRVALEPENPYDLDKMINGLKLLVQSDPCAEYEQLP
SGEHVVLTAGELHLERCLKDLEERFAKCKIQAGEPIVPYRESTVAAAEMNPPKNPELGRG
VVVSATANKQLSVRLQVRPLPPSVTEFLSKNAGSIKRLNSERKAQETQHSDEQTAAEVEG
AEQDGMQEAEQREMGQTLSPVEFKKQLKDAFAEAKKEREIWTEDVIDKITAFGPRNRGPN
MLIDTTSAGICGKALVDTADTDDTTERASTARSFASTIIYAFQLATAQGPCCAEPVQGLA
VFLQDVTLDESTAETDHHRLTGEVIKAVRSAIHAGFLDWSPRMLLAMYSCEIQASTDVLG
RVYAVLTRRRGTILSETMSSSAASTTGNQTFTISALLPVAESFGFSDEIRKRSSGSASPQ
LRFAGFEMLDEDPFWVPFTEDELEDLGELADRENVAKRYVDRVRRRKGLLVKEVKVEAEK
QKTLKR
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccatcccctccgaccagctcgtcaagctgcagcagcaggccgagggcatcagg
aatatctgcatcctcgcccacgtcgaccatggcaagacgtcgctcaccgacgccctcatc
gccaccaacggcatcatctcccccaagctcgccggcaagatcagatacctcgactcgcgc
ccagatgaacagctccgcggcatcaccatggagtcgtcggccatctcgctgtacttctcc
ctgctgcgccgctcggcccccgacgctcagcccgagaggaaggagttcctcatcaacctc
atcgactcgcccggacacatcgacttcagctacgaagtctccacagcctcgcgtctctgt
gacggcgccatcgtgctcgtcgacgccgtcgaaggcgtctgcagtcagaccgtcaccgtc
ctgcgccaggcgtggatagaaaagctcaagcccctgctcgtcattaacaaaatggacagg
ctcatcacagaatggaagatgaccccagctgacgcccacacacacttgaacaaactcgta
gaacaggtaaacgccgtcatgggcagcttctaccaaggcgagcgcatggaggacgacctg
cgctggcgtgagaagatggaggagaggctcaacgccgctgccgccgagaagacaaacacc
acaccatctgcagtagcagaggccggtgacagtatagacaccaccaccacacccgccgag
tacgaggagaaggatgacgaggacatctactttgctcctgaaaagaacaacgtcatcttc
gccagtgccatcgacggctgggccttcacagtgaagcagttcgccagcctctacgagcgc
aagctcggcatcaagcgctccgtactcgaaaaggtgctgtggggcgactacttcctcgac
cccaaaacgaagcgagtcctcagctccaagcatctcaaagggcgtcacttgaagcccatg
tttgtgcagctggtgctcgagaacatatgggccatctacgatgccactacgggaggtaac
aacgggaagggagaccccgccatggtcgaaaagattacaaagtctctcaacatcaccctc
ccaccacacgtcttgcggtcgcgcgacccacgtgccatattgactgcgctcttcgccgca
tggctaccactgtcgaccgccctgctggtctcagtcaccgagtatctcccatcgcctacc
aaagcccaagcggagaggatgcccgagatcattgacacatcggtgggcgccgaccatgtc
gcccctgaagtgcgaaaggccatcacccacttcgacacctccaaagacgcgccggttgtg
gcctacgtcagtaaaatgttctccgtcccggaaagcgaactaccacagcacaagcgaaga
gcaggcgcgctcactgccgaagaggcgcgtgatcttggacgcaagaagcgcgcagaactc
gcccgacagcaggccatcgcccatggcgagacttcagatctgggaaacagtacagacgca
ctcagctccaccgccatcggcgaagacgaagccaatgctgaagaggcagcgcctacggat
gagaaggccgagcacttgatcggttttgcccgcatctactccggcacgctcagcgtcggt
gacgaggtctatgtgctgggccccaagttctctccagcgaacccacacgcagagcccgcg
ccgaagaaggttaccgtcactgcgctgtacctcatgatgggacgtggcttggagtctctg
acttcagtgcccgccggcgtggtgtttggcattggtggtctcgaaggacaaatgctcaag
tcgggaacgctttgctcgcagctgccaggctctctcaacctggctggtgtgacgatgggc
tccgagcccatcgtccgtgtcgccttggagccggagaacccttacgatctcgacaagatg
atcaacggcttgaaactactggtgcagtctgatccgtgtgccgagtacgaacagctgccc
agcggtgagcacgtcgtcctgacagcgggcgagctgcatcttgagcgatgtctgaaggac
ctcgaagagcgcttcgccaagtgcaagatccaagctggcgaaccaatcgtcccctaccga
gagtcgactgtcgccgcagccgaaatgaaccctcccaagaatccagaactcggccgtggt
gtggtggtgagcgcaacagcgaacaagcagctatcggtgcgtctgcaggtccgcccgctg
ccgcccagtgttacggagttcttgagcaagaacgctgggtcgatcaagaggctgaactct
gaacgcaaggcgcaagagacgcagcactcggacgagcagacagccgctgaggtggagggc
gctgagcaggacggtatgcaggaggccgagcagcgcgagatgggtcagacgctcagccca
gtggagttcaagaaacagctcaaggacgcttttgctgaagccaagaaagagcgggagatc
tggacagaagacgtgattgacaaaatcactgcgtttggaccgcgcaacagagggccaaac
atgctgattgacaccaccagcgcaggcatctgtggcaaagctcttgtcgataccgccgat
accgacgacacaacagagcgcgcgtccactgcgcgctccttcgcctcaaccatcatctat
gccttccagctcgccacggcacaaggtccctgctgcgctgagcccgtccaaggcctcgcc
gtcttcctgcaggacgtgaccctcgacgagtccacagccgagaccgaccaccaccgcctc
acgggcgaagtcatcaaagccgtgcgctcagccatccacgctggcttcctcgactggtcc
ccacgcatgctactcgccatgtactcctgcgagatccaagcttcaaccgacgtactcgga
cgcgtctacgccgtgctaacccgacgccgcggcaccatcctctccgaaaccatgtcctcg
tccgccgcctcgacaaccggcaaccaaaccttcaccatcagcgcgctcctccctgtcgcc
gagtcctttggcttttctgacgaaatccgcaagcgctcctccggctccgcatccccacag
ctgcgcttcgccggcttcgaaatgctcgacgaagaccccttctgggttcccttcaccgag
gacgaactcgaggacttgggtgagcttgcggatcgcgagaatgtcgccaagcgctatgtc
gatcgcgtgaggcgcaggaagggtctgctcgtcaaagaagtcaaggtcgaggctgagaag
cagaagacgcttaagcggtga
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