Ascochyta rabiei: EKO05_0005611
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Entry
EKO05_0005611 CDS
T09445
Name
(RefSeq) Rhamnogalacturonan endolyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
EKO05_0005611
Enzymes [BR:
arab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
EKO05_0005611
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Gene cluster
GFIT
Motif
Pfam:
fn3_3
CBM-like
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
62213972
NCBI-ProteinID:
XP_038798627
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Position
9:complement(join(153028..153238,153293..155154))
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AA seq
690 aa
AA seq
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MRFEIALVLLACLQFVSAHLTANETSAYLQLKNDRLFVSVNKTTGGIDTLVLDGQDLLGS
AAYIPYSPGGSSGNGRYGVGPYLDCYCIPASGPSSTGSGSYTPGSLDPTYQLFHGVDTHN
VSYGGVVMSEVYPPTGQLLQQYWFLRDGETGLHTFSRIAYHNSTTPFLRNLQEFRTLFRP
STELWTDLVTDNELASPMPIPNPASGNLTNSTTVQDATWYIGNRTADPYAEEFADYFTKY
TFAAEWRDQTVHGLFGDGSQSKDNATFGAWLVMNTKDTYYGGPTHSDLVVDGILYNYMVS
NHHGAGTPNITDGFDRTFGPQYYHFNKGPAGSSWRTLRDEAVQYASPSWNADFYDSIADH
IPNYVPTVQRGAWKAKVKLPKGAKRAIAVLAQNGVDYQDNVIDPLAYQYWADIGSDGKVG
IERVKAGTYRLTVYADGIFGELVKDNVVVKAKKTTDAGTLKWEAESAGTELWRIGTPDKA
GGEWRHGHVPAKTPLHPPEYRIYWGAYDYLSDFPNGVNYHVGRSDTYKDFNYVHWSVFGG
YANTQRPQQTAGHGEINNWTITFDVDEHKLAHKKNATFTIQLAGAKTAAGNSDTFNATQP
WNNIPFVVVVNGHELEPWIIPYNQSSSCATRSAIACYTLSHKFLFPTSYLASNGTNEIVL
SLPYNATDYESAVLPRSIYVQYDALRLEVK
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcgaaattgcgctggttctgcttgcttgtttgcagtttgtttctgcgcatctc
accgccaacgagacttcagcgtacctccaactcaagaatgaccggttgtttgtttctgtg
aacaagaccactggcggcatcgacacacttgtgctcgatggacaagacttgcttggatca
gcagcctatattccatactcccccggaggctcctcaggcaacgggcggtacggtgttggc
ccgtatctcgattgctattgcatcccagcaagcggtccttcaagtactggatcaggctcg
tacacacctggttcccttgacccaacgtatcaactctttcacggtgtggacactcacaat
gtttcctacggtggtgtcgtgatgagcgaggtgtatccaccaaccggccagctactgcag
cagtattggttcctccgcgatggggagactggcttgcacacctttagtcgaattgcgtac
cacaattctactacaccgtttctgcgcaatctacaggagttccggacgctttttcgaccc
agtacagaactctggaccgacttggttaccgacaatgagcttgcctcgcccatgccgatc
cccaatcccgcctctggcaacttgaccaactcgacgactgtccaggacgcaacgtggtac
atcggcaaccgcacagctgacccgtacgcggaggagtttgcagactacttcaccaaatac
acatttgcggcagagtggcgcgatcagaccgtgcatggcttgttcggagatggttcgcag
agtaaggacaacgccacatttggcgcctggctggttatgaatacgaaagatacctactat
ggtgggcccacacactcggatctcgtggttgacgggatcctctacaattacatggtctcg
aatcaccacggcgcaggcacgcccaacatcaccgacggatttgaccggacgtttggacct
cagtactatcacttcaacaagggacccgctggaagctcgtggagaacactgcgtgacgaa
gccgtccagtatgcttccccgtcttggaatgccgacttctatgacagtattgcggaccac
ataccgaactacgtccccactgtacaaagaggagcgtggaaggccaaggtcaaactaccc
aagggtgccaagagagctatcgcagtgcttgcacagaacggtgtagactaccaggacaac
gtgattgatccacttgcttaccaatactgggccgacattggcagtgatggcaaagtgggg
atcgaacgtgtgaaagcgggcacttaccggttgaccgtgtatgcagatggcatctttggt
gagctggtcaaggataacgtagtcgtcaaagccaagaagacgacagatgctggcacactg
aaatgggaagccgagtctgcaggaaccgagctctggcgcatcggtaccccagacaaagcg
ggtggagaatggcgacatggccatgtgccagctaaaaccccactccaccctccggaatac
cgtatctactggggcgcgtatgactatctctccgacttccccaatggcgtcaactaccac
gtcggtaggagcgatacgtacaaggatttcaattacgtccactggtctgtttttggagga
tatgcaaatactcaaagaccgcaacaaacggccggccacggcgaaatcaacaactggaca
atcacattcgatgtagatgagcataaactagcgcacaagaagaacgcaaccttcacgatc
cagctagccggggccaaaacagccgctggaaacagcgacacattcaacgccacgcagccg
tggaacaacatccctttcgtcgtcgtcgtgaacggacacgaactagagccgtggatcatc
ccgtacaaccaatcctcctcctgtgcaactcgaagtgccattgcttgctacacgctgagc
cacaagttcttgttcccgacaagctatctggccagcaacggaactaatgagattgtgttg
agcctgccgtacaacgctacggactacgagagtgcggtgctgccgaggagtatatacgtg
cagtacgatgcgcttaggttggaggttaagtag
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