Ascochyta rabiei: EKO05_0005685
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Entry
EKO05_0005685 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
arab
Ascochyta rabiei
Pathway
arab03022
Basal transcription factors
arab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EKO05_0005685
09124 Replication and repair
03420 Nucleotide excision repair
EKO05_0005685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arab03021
]
EKO05_0005685
03400 DNA repair and recombination proteins [BR:
arab03400
]
EKO05_0005685
Transcription machinery [BR:
arab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EKO05_0005685
DNA repair and recombination proteins [BR:
arab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EKO05_0005685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Med4
UPF0146
TAZ1_RBM
Motif
Other DBs
NCBI-GeneID:
62214049
NCBI-ProteinID:
XP_059492632
LinkDB
All DBs
Position
9:join(397813..397831,397879..398126)
Genome browser
AA seq
88 aa
AA seq
DB search
MVKAIRGTLVRCDASIKAMLVDIDSKNNNEYIIEELDEEHILVKETKVNELKGRLNNVRA
FWRGDMCFTKTMQMMRERLKEPESSDSE
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaggctatcagaggcacactggtgcgatgcgacgcgtcgatcaaagccatgctg
gtcgacattgacagcaagaacaacaacgaatacatcatcgaggagctggacgaggagcac
atcctggtgaaggaaactaaggtcaacgagcttaagggccggctgaacaacgtaagagcc
ttctggcgcggcgacatgtgcttcactaaaacaatgcagatgatgagagagcgcttgaag
gagcccgagagttcagactcggaataa
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integrated database retrieval system