KEGG   Ascochyta rabiei: EKO05_0005685
Entry
EKO05_0005685     CDS       T09445                                 
Name
(RefSeq) uncharacterized protein
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
arab  Ascochyta rabiei
Pathway
arab03022  Basal transcription factors
arab03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:arab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    EKO05_0005685
  09124 Replication and repair
   03420 Nucleotide excision repair
    EKO05_0005685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:arab03021]
    EKO05_0005685
   03400 DNA repair and recombination proteins [BR:arab03400]
    EKO05_0005685
Transcription machinery [BR:arab03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     EKO05_0005685
DNA repair and recombination proteins [BR:arab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     EKO05_0005685
SSDB
Motif
Pfam: Tfb5 Med4 UPF0146 TAZ1_RBM
Other DBs
NCBI-GeneID: 62214049
NCBI-ProteinID: XP_059492632
LinkDB
Position
9:join(397813..397831,397879..398126)
AA seq 88 aa
MVKAIRGTLVRCDASIKAMLVDIDSKNNNEYIIEELDEEHILVKETKVNELKGRLNNVRA
FWRGDMCFTKTMQMMRERLKEPESSDSE
NT seq 267 nt   +upstreamnt  +downstreamnt
atggtcaaggctatcagaggcacactggtgcgatgcgacgcgtcgatcaaagccatgctg
gtcgacattgacagcaagaacaacaacgaatacatcatcgaggagctggacgaggagcac
atcctggtgaaggaaactaaggtcaacgagcttaagggccggctgaacaacgtaagagcc
ttctggcgcggcgacatgtgcttcactaaaacaatgcagatgatgagagagcgcttgaag
gagcccgagagttcagactcggaataa

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