Ascochyta rabiei: EKO05_0005709
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Entry
EKO05_0005709 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K13103
tuftelin-interacting protein 11
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arab03041
]
EKO05_0005709
Spliceosome [BR:
arab03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
EKO05_0005709
Other components
Complex C specific factors
EKO05_0005709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
G-patch
G-patch_2
MbeD_MobD
Motif
Other DBs
NCBI-GeneID:
62214071
NCBI-ProteinID:
XP_038798726
LinkDB
All DBs
Position
9:complement(472972..475077)
Genome browser
AA seq
701 aa
AA seq
DB search
MDDPPPPKRKLHFRQEPKKKPKTDPGSAALKTGFGAKMMAKMGYRGTGGLGKAGDGIAEP
IQVVLRGSKGGVGIVPEKSEQQKREERRKAAANGEHPLDSDDEEHRERREKANAPRKART
AAPRPKKTLFELEAAGMHVPPALQSIVDATTGASTPTSAVSLRPSDVVPFENSLQARVRR
DLHRFSDAFEELQIESSAIAPQEQALEQELDLLERHVREIRDLAARLQAMRAATFTDVCS
GLRDLRAAYPSKPLHRESIALLHPHFSHMVASWSPLDNALEEAAAAFSLLSNVIQPRSRS
FASPAYTHPSDAVLAPTRLDDEPPIKRGTTSSYESMMLKLWLPSVSSALTHWDVKDPRPM
VHLIDVWRPVLPPFVAKRVLEQITRKLSTSVHEWNPRKFRRSPHTWILEWLPYLRPADLD
PKGSGLVAEIKRKLRLALQYTDLSRGPLSGMEQWSKVFGKAEIDRMLTNHLVPRFALYLR
DHFEVNPLDQDVAPLGAVLAWRGLLSHQTLGELLKAHFFPKFMDTLHEWLSTEGFVFNEV
GEWIAWWREMLGDDINALPSVSSCWEAADTLIGQASELGEARLTDLPAPRTESAQAAPER
PERPQSIHAEPPRPAAPPEETPFRDLAEEFCSEENLLMMPLREAHAATGLPLFRITASAT
GRGGAVAYFQGDILWVQNKKDKALWEPTGLDETLIAKAEGK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggacgacccgccgccgccaaagcgcaagctccacttccgccaggaacccaagaagaag
cccaagacggacccgggcagcgccgccctcaagacgggcttcggcgccaagatgatggcc
aagatgggctaccgcggcaccggcggcctggggaaggcgggcgacggcatcgcagagccc
atccaggtcgtcctgcgcggcagcaagggcggcgtcggcatcgtgcccgagaagagcgag
cagcagaagcgcgaggagcgcagaaaggcagccgccaacggcgagcaccctctcgactcg
gacgacgaggagcatcgcgagcgcagggagaaagcaaacgcgccgcgcaaagcccgcacc
gccgccccgcggcccaagaagacgctgttcgagctcgaggccgccggcatgcacgtgccc
cccgccctgcagtccatcgtcgacgcaaccaccggcgcctccaccccgacctcggccgtc
tccctgcgccccagcgacgtcgtgccctttgagaactcgctgcaggcccgcgtgcgccgc
gacctccaccgcttctccgacgccttcgaggagctgcagatcgagtccagcgccatcgcc
ccgcaggaacaggccctggagcaggagctcgacctgctcgagcgccacgtgcgcgagatc
agggacctcgccgcacgactgcaggccatgcgcgccgccaccttcaccgacgtctgcagc
ggcctgcgggacctgcgcgccgcctacccgtccaagcccctccaccgcgagtccattgcc
ctcctccacccgcacttctcccacatggtcgcctcctggtcgccgctcgacaacgcgctc
gaagaagcagccgccgccttctcactcctctccaacgtcatacagccgcgcagcaggagc
ttcgcctcgcccgcctacacccacccctccgatgccgtgctcgcacccacacgcctagac
gacgagccgcccatcaagcgcggcaccacctcgtcgtacgagtccatgatgctcaagctc
tggctgccctcggtcagctccgccctcacccactgggacgtcaaggacccccgccccatg
gtccacctgatcgacgtctggcggcccgtgctgccaccttttgtcgccaagcgggtgctt
gaacaaatcacgcgaaagctctcgacctcggtccacgagtggaatccacgcaagttcagg
aggagcccgcacacctggatcctcgagtggctgccctacctccgccccgccgatctggac
cccaagggctcgggcctggtggccgagatcaagcgcaagctgcggctcgcgctgcagtac
acggatctgtcccgcgggcccttgtccggcatggagcagtggagcaaggtctttggcaag
gccgagatcgaccgcatgctcaccaaccacctggtaccgcgctttgccctctacctgcgc
gaccacttcgaggtcaacccgctggatcaggacgtggccccgctcggcgctgtcctggct
tggagggggctcctctcccaccagacgctcggggagctgctcaaagcccacttcttcccc
aagttcatggacaccctgcacgaatggctgtcgaccgaaggcttcgtcttcaacgaggtc
ggagagtggatcgcctggtggcgcgagatgctgggagacgacatcaacgcgctaccctcc
gtgtcgtcgtgctgggaagcagcggacacgctcatcggccaggcctcggagctcggagag
gccaggctgacagacctgcctgcgccacgcacagaaagcgcccaagccgcgcccgagcgg
cccgagcggccccagtccatccacgcagagccccctcggcccgcagcgccgccggaagag
acgcccttcagggacctggcggaagagttctgcagcgaggagaacctcctgatgatgccc
cttcgcgaagcccacgccgccacgggtctcccgctgttcagaatcacagccagcgccacg
ggacgcggcggcgcagtcgcctacttccaaggcgacattctgtgggtgcagaacaagaag
gacaaggcgctctgggagcccacggggctggacgaaaccctcattgcaaaagccgaaggc
aaataa
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