Ascochyta rabiei: EKO05_0005842
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Entry
EKO05_0005842 CDS
T09445
Name
(RefSeq) regulator of (H+)-ATPase in vacuolar membrane
KO
K24155
rabconnectin-3a
Organism
arab
Ascochyta rabiei
Pathway
arab04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
EKO05_0005842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arab04131
]
EKO05_0005842
Membrane trafficking [BR:
arab04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
EKO05_0005842
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
EKO05_0005842
RAVE complex
EKO05_0005842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_WDR5
Beta-prop_THOC3
TPR_GEMI5
BUD22
NOA36
Motif
Other DBs
NCBI-GeneID:
62214202
NCBI-ProteinID:
XP_059492664
LinkDB
All DBs
Position
9:complement(join(851846..852997,853043..853474,853522..855843,855891..856079,856139..856219))
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AA seq
1391 aa
AA seq
DB search
MRGLLPGRPQAKLQAVAHGLWEGNQIIAYISGNALVILDRPNHVIQTIYMDDEEALEAVA
LDQGTGKLAACSTRHMYIYQPYSVEYGVYKWSLQGSMALPNQADSITTLSWGMPHEIVAG
SAALTLFNTHSTIECIWTKELANPVKFAHFSPDAELIASTGWYDRLLKIWRRLAFGTADQ
RFDYYYLPHPQPITGVHWRQPYKDQTADNVLYTICADYKVRVWVPGEHHGVDGMHLWTEV
DLLGSIEPGLVSQEKQSRKRYAFFIDGKHFTHATERAMAQASAEEKSHGVALHHLIEVAN
RSPEICVVLDDHGNMSAWGFENIGARVKLVTDVFNIVHVDGLHLHFANQPEAIEDNVQFY
AFIGERPDSDFTLLSHHFDGRIEWLESRIDYLFDPSPQAQRISRKAIWTGHSHAIKKVNR
TASGRALVSRTVTDECIVWTQRPTEHGTTLHRHSTVKVSEHIHRTALLQDGNFVVFLHHN
HIALWDTRGPLAVEIARLEYRLQGKPLCLLAIPETEVGGRCVHIATISSEMKGICWEVTM
PLLTRDPVTGRKRSTVVPHTNGYTNGHTEISLDQYSTFDLGSEDDLAFILPVDPAGSAPV
ISGFLDTFARDIAISYSKSGVIKSWTARVDTEEHKIDWLLTSTVDTNVHEPSLASGTSIR
KAALVDAEKTTLTIWNTRSAQLEHEETFDGQGVIQDLDWSSTPDNQSILAVGFPHRVVIY
AQLRYDYLNEGPSWVQIRDVRIRDITPHPIGDSVWLGSGNLVIGAGNQLFIQDEHVEVDE
ELFPSLRMISRKTASIDIFAAVSRLNGPLPIYHPQLLSQCVLSGKIVLVQRILLRLYQKL
KFWTEGEELKSSLGFLPEDFSEDEAHMTASKREVQSSYADFSDNDEPETVTEEVAANLKD
LLTTKQMPLLSSREQFRLADIIECIGMVEKHRRSIDDNAGRFMLFFRQHVLSESQKAPLS
WREIVWAFHSGSQDILLDLVSRHFNGKMMWQHARQCGVFMWMSDINALRAQFEVIARNEY
TKTDEKNPVDCSLYYLALHKKAVLVSLWRIATWSREQGATHRLLSNNFQEERWKTAALKN
AYALMGRRRFEYAAAFFLLADHLQDAVQVLHNQLKDTQLAIAVARVYGGDDHPVLLTFLK
DKILPQAARDGNRWLATWAYWLLGRRDTAVRSLVTPLSRLLSPPETPNFLSKSYLTDDPA
LVVLYKQLREKSLQTLRGATMIGMREEWEFVLHTANLYERMGCDVLALDLVKSWEFLLTP
PPKIVPGRPPLSPLMPRDSFHANGPNQAATDFDFDPRKLLRRRSSLVVADLPAREHVKNE
LAQTDGAVAEESEDDGNTGEDDDKKEEEEEDEEEEDEEEDDDEPPKPAPKKPPPTQFHEP
DANSLLDAFGF
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcctactcccaggacggccgcaggctaagctgcaagctgtcgcccacggcttg
tgggaggggaatcaaatcattgcatatatctctggcaacgctctcgtgatactcgatcgc
cccaaccatgtcatccagaccatctacatggacgacgaggaggcgcttgaagctgttgcg
ctcgaccaagggacgggcaagcttgcagcctgctcgacgcgccacatgtacatataccag
ccgtacagtgtggagtatggggtctacaagtggtcgctgcagggcagcatggcgcttccc
aaccaagccgattccatcacgacactctcatggggcatgccgcacgagatcgtcgctggc
agcgcggccctcactctcttcaacacccacagcaccatcgagtgcatctggaccaaggag
ctggccaatcccgtcaagttcgctcacttttctcccgacgccgagctcattgcctcgaca
ggctggtacgaccgattgctgaagatctggcgacgactcgcattcggcacggcggaccag
cgcttcgactactactacctgccacacccccagcccatcacgggcgtccactggcgacaa
ccatacaaggaccagaccgccgacaacgtactatacacaatatgcgcagactacaaggtg
cgcgtgtgggtgccgggggagcaccacggcgtcgacggcatgcatttgtggaccgaggtc
gacttgctgggctcaatcgagccaggccttgtgtcgcaagagaagcagtcgcggaaacga
tacgccttcttcatagacggaaagcacttcacacacgcgacagaacgagcgatggcgcag
gcttcagcagaggagaaaagccacggtgttgcgctgcaccatctcatcgaggtggcgaac
cgcagccctgagatatgtgtagtgctagacgaccatgggaatatgtcggcttggggcttt
gagaacattggtgctagggtcaagctggtcaccgacgttttcaacattgtgcatgtcgat
gggctacatttgcactttgccaaccaacccgaggctatcgaggacaacgtccaattctat
gcattcattggcgaaaggcctgactcggacttcaccctactgtcacatcacttcgatggc
cggatagagtggcttgagtcacgaatcgactatctcttcgatccctccccgcaggcacag
cggatatcgagaaaggcgatctggacgggacattcgcacgctatcaagaaggtcaatcgt
acagccagcggccgagctctcgtctcgagaacggtcacagacgagtgcatagtgtggacg
caacggccgacagagcacggaaccacactgcatcgacacagcactgtcaaggtcagcgag
cacatccacagaacggcattgctacaggacggcaactttgtcgtcttcttgcaccacaat
cacatcgcactgtgggatacaagaggccctctagcggtagaaatcgcaaggctggagtac
agactgcaaggcaagcctctttgtctgcttgcaatcccagaaaccgaagttggcggccgt
tgcgtacatatcgcgaccatcagctctgagatgaagggtatatgttgggaagtcacaatg
cccttgctcacacgagatcctgttaccggtcgcaaacgctcgaccgttgtgcctcacaca
aacggctacaccaacgggcatactgagatttcactagatcaatacagtaccttcgacttg
gggtctgaggatgatcttgcgtttatactgcccgtcgatccagctggttcagcgccagtc
atctcaggctttctcgatactttcgcgcgcgacattgcgatttcgtatagcaagtccggt
gtgatcaagtcttggacagctcgtgtcgacaccgaagagcacaagatagattggcttctt
acctcgaccgtggacaccaacgtacacgagccgtcactcgccagcggtacatctatacgg
aaagcagctcttgtagatgctgagaagactaccttgaccatctggaatactcgaagtgca
cagctcgaacacgaagaaacttttgatggacaaggcgtcatccaagatctcgactggtct
tccactccggacaatcagtccattcttgctgtgggatttccacatcgagtcgtcatctat
gcgcagctacgatatgactacctgaacgaaggtccatcatgggttcagattcgagatgtg
cgcatcagagacatcactccccaccccatcggcgactcagtatggttaggcagtggcaac
ctcgtcattggtgcaggcaaccaactgttcatacaggatgaacatgtcgaggtggacgag
gagttattccctagtctgcggatgatctctcgcaagactgcttcgattgacatctttgca
gcagtgagccggctcaacggtccgctacccatataccatcctcagcttttgtcgcaatgc
gttctctctgggaaaatcgtactcgtccagcgaatcttgctacgactttatcagaagcta
aagttttggacggagggtgaggagctgaagagttctttgggcttcctaccagaggatttc
tccgaggatgaggcgcatatgacggcatccaagagagaggtgcagtcatcgtacgctgac
ttctccgacaacgatgagccggaaactgtgactgaggaagtagccgccaacctcaaagat
ctcctaaccaccaagcaaatgcctctgttgtcgagtcgcgagcaattccgccttgccgac
attatcgagtgcataggcatggtcgagaagcaccgccgatccatcgatgacaacgcaggc
cgtttcatgctgttcttccgacaacacgtgctgagcgaatcacagaaagcacccctctcg
tggcgcgaaatcgtttgggcgttccactcgggaagccaggacatcctgctagacctcgtg
agcaggcacttcaacggcaagatgatgtggcagcacgctaggcagtgcggtgtattcatg
tggatgtctgatatcaacgccttgcgtgctcagttcgaagtcatcgctcgcaacgagtac
accaaaaccgacgagaagaaccctgttgattgctcattgtactaccttgccctgcacaag
aaggctgtgctggtcagcctatggcgaatcgctacttggtccagggaacaaggcgcaaca
catcgcttgctatcgaacaatttccaggaagagcgatggaagactgccgcgctgaagaac
gcatatgcactgatgggcagacggagatttgagtacgccgctgcgttcttcctgcttgct
gatcatctccaagacgcggtacaagtgctgcacaaccagctcaaggacacacagctggcc
attgctgtggcgagagtctacggcggcgacgaccatcccgtgctgctcaccttccttaag
gacaagattcttccccaagcagcacgtgacggcaatcgctggcttgcaacatgggcgtac
tggcttctcggccgccgcgacaccgccgttcgctccctcgtcacgccactctcacgcctc
ctgtcgccgcccgagaccccaaacttcctgtccaagtcatacctcacagacgacccggct
cttgtagtcctctacaaacagctccgcgagaaatccctccagacgctccgcggcgcaacc
atgatcggcatgcgcgaggaatgggagtttgtcctgcacaccgccaacctgtacgagcgc
atgggttgcgatgtgctcgctctcgatctcgtcaagagctgggagttcctgctcacgccg
cccccgaagatcgtacccgggcgcccaccactcagcccgcttatgccgcgggacagcttc
cacgcaaacgggccgaaccaggctgccacggactttgactttgatccgaggaagttgctc
aggcggaggagtagcttggtcgtcgcggatctgccagctagagagcatgtgaagaatgag
ttggcgcagaccgacggtgcggttgccgaagagagcgaggacgacggcaacacaggtgag
gacgacgacaaaaaagaagaagaggaagaagacgaagaggaggaggatgaggaggaggat
gacgacgaaccacccaagccagcacccaaaaaaccacccccaacccaattccacgaaccg
gatgcaaacagcttgctcgacgctttcggcttctaa
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