KEGG   Ascochyta rabiei: EKO05_0006182
Entry
EKO05_0006182     CDS       T09445                                 
Name
(RefSeq) DNA replication factor C complex subunit Rfc1
  KO
K10754  replication factor C subunit 1
Organism
arab  Ascochyta rabiei
Pathway
arab03030  DNA replication
arab03410  Base excision repair
arab03420  Nucleotide excision repair
arab03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:arab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EKO05_0006182
   03410 Base excision repair
    EKO05_0006182
   03420 Nucleotide excision repair
    EKO05_0006182
   03430 Mismatch repair
    EKO05_0006182
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:arab03032]
    EKO05_0006182
   03400 DNA repair and recombination proteins [BR:arab03400]
    EKO05_0006182
DNA replication proteins [BR:arab03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    EKO05_0006182
DNA repair and recombination proteins [BR:arab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     EKO05_0006182
SSDB
Motif
Pfam: RFC1 BRCT AAA Rad17 AAA_22 AAA_33 RuvB_N AAA_16 AAA_5 nSTAND3 AAA_14 AAA_28 AAA_18 NACHT PTCB-BRCT
Other DBs
NCBI-GeneID: 62214900
NCBI-ProteinID: XP_038797688
LinkDB
Position
10:complement(join(251075..251411,251460..254246,254303..254400,254566..254649))
AA seq 1101 aa
MPADIRSFFGGGPPKASQGSEGSQKKAEKPAPKKAAPKKGRASRVVMDESDDDDDEVEEV
KPKKATPKQPAPKKQKREATPELEETTTSDFFAKSNKPKRTEPVKKAVEKTAETAKATPK
KAAGRASKPATPASAGRASGRAKKPVTSYAERDNGDDFPDEDLDDADDIFGDDYKGKGKD
DYVEGGESDEDLPVKLPHRGTPKAPAKSQKKIKEEDDFEPEEDVDMKDLDADDDLLELEV
EERAVKSEPNKTTTGRKRKSPEPDPEEEEDEEEEKPRKKATKKAAPAKSPVKKKAKKEEE
VESADIQAIYDSIPTVRAPTPPPQDPNKKFDWRANAGRSEPAPIGGGSSEMPSGSETCLA
GLNFVFTGVLQKWGRTEAQELVKRHGGKVTGAPSKKTSYVILGQDAGPSKLRKIQEMSIR
TIDEDGLALLIEKLTEAGNKGDSKAQAAHKEKLRKEEEQIKKQAAELEKEEKQRLKDLKA
AQTAKAAAGKATASGITAAAQSAGPEVDSRLWTTKYAPSSLNQICGNKATVEKIQRWLQK
FPKNLKTGFKLAGADGSGVFRAVMLHGPPGIGKTTAAHLVAKLEGYDIVERNASDTRSKK
LIEEGLRGVLSTNSLHGYFAGDGRQVEASKKKLVLIMDEVDGMSAGDRGGVGALAAVCKK
TEIPMILICNDRKLPKMKPFDYVTFDLPFRRPTVDQIRSRIMTIAYREGLKMPPPVINAL
IEGSHADIRQVVNMLSTAKLDEEAMDFDKGKQMSKSWEKHVILKPWDITQKILGGGMFAQ
SSKATLNEKIELYFNDHEFSPLMLQENYLGTNPIRALNYSGKEKTLKALELASEAADSIS
DGDLVDRMIHGSQQQWSLMPTHAVFSFVRPASFVSGSTAGNQTRFTSWLGRNSSQNKLMR
LVKEIQAHMRLRSSGDRHEVRQQYIPVLWTEMIQKLQKEGKESVGEIIELMDSYFLTKDD
FDAIMELGIGPMDQEKVKIETQAKATFTRLYNQQSHPLPFMKASSVVAPKKQAKEKPDLE
EAIEESDEGEVVEEVKEEDEDVDLSKDKYVKQPKKKAAPKKKAAATGKGKKRVKEESDDD
EEEVKPKAKGKGKAAATKAKK
NT seq 3306 nt   +upstreamnt  +downstreamnt
atgccggccgatattcgaagcttctttggtggtggcccgccaaaggctagccagggcagt
gagggctcgcagaagaaagctgaaaaacctgcaccaaaaaaggcagcacccaaaaagggc
cgtgcaagtcgagtcgtaatggacgagtctgatgacgacgacgacgaggtcgaagaagtc
aaaccgaagaaagcgacacccaagcagcctgcgccgaagaagcagaagcgtgaagctaca
cccgagctcgaagagacgaccacatccgacttctttgcgaaatcgaataagcccaaacgg
actgagccggtcaaaaaagctgtagagaagacggctgaaacagcaaaggccacccccaaa
aaggcagccgggcgagcatcgaagcctgccacacctgcaagcgctggcagagcatctggg
agagcgaagaagccggtcacatcgtatgcggagcgggacaacggcgacgactttcctgac
gaagatctcgacgatgcggacgacatctttggagacgactacaaaggcaaagggaaggac
gactatgtcgagggtggtgagagcgacgaggatctaccggtcaaacttccgcatcgcgga
acaccaaaagcaccggctaagtcacagaagaagatcaaggaggaagacgactttgagcct
gaagaagacgttgacatgaaagacctcgacgcggacgacgacctgctcgagctggaggtg
gaagagcgcgctgtcaagagcgaacccaataagactacaacagggcgaaagcgcaagtca
ccagaaccggatccagaagaagaggaggacgaggaggaggagaagcctagaaagaaagcc
acaaagaaggctgctcctgcaaagtcgccagtcaagaagaaagcaaagaaagaggaggag
gtggagagtgcggacattcaagcaatttacgacagcatcccaaccgtacgcgcgccgact
cctccgcctcaagacccaaacaagaagtttgattggcgagcgaacgctggccgcagtgag
ccagcccctataggagggggttcctccgagatgccgtccggttccgagacgtgtctcgct
ggcctcaacttcgtcttcactggagtgttgcaaaagtggggtcgcaccgaagcacaagag
ctcgtcaagcggcacggaggcaaagtgacaggtgctccgagcaaaaagacgagctacgtg
atcctagggcaagatgctggccccagcaagctacggaagatccaggagatgagcatcaga
accattgacgaggatggcttagcactgctcatcgagaagcttacagaggctggcaacaag
ggcgactcgaaagcacaagcagcacacaaagagaaactacggaaagaggaagagcagatc
aagaagcaggcggctgagctcgaaaaggaagagaagcagcgcctgaaggacctgaaggca
gcgcaaacagccaaagcagctgccgggaaggcaaccgcttctggaatcactgctgccgct
caaagcgctggtccagaggtggactctcgcctatggactacaaagtatgcgccgtcgtca
ctgaatcagatatgcggcaacaaagccacagtcgagaagatccagcgatggttgcagaag
ttccccaagaatctcaaaactgggttcaagctcgctggcgcggatggcagtggcgtcttc
cgcgccgtcatgcttcacggtccaccaggtatcggcaagacgaccgcagctcacctcgtg
gccaagctcgaaggctatgatatcgtcgaacggaacgcaagcgacactcgcagcaagaag
ctcatcgaagaaggcctacgtggcgtactcagcactaattcgttgcatggttactttgct
ggcgacggtcggcaggttgaagcgtctaagaagaaactcgtcctgataatggatgaagtc
gatggtatgtctgcaggcgatcgcggcggtgtaggcgctcttgctgcggtctgcaaaaag
actgagattccgatgatcttgatctgcaacgaccgaaagctgccaaagatgaagccattc
gactatgtcacattcgacctaccattcagacgaccaactgttgatcagatccgctctcgc
atcatgacaattgcataccgcgaaggtctgaagatgccgccacccgttatcaacgcgctg
attgagggcagccatgccgacatccgccaagtcgtcaacatgctctccactgctaagctg
gacgaggaagcgatggactttgataaaggcaagcagatgagcaaaagctgggaaaagcac
gtcatcctcaagccatgggacattacacaaaagattcttggtggtggcatgttcgctcag
agcagcaaagccacgcttaacgaaaagatcgagctgtacttcaacgaccacgagttcagt
ccgctcatgcttcaggaaaattacctcggtacgaatccgatcagagcgctcaactactct
ggcaaggagaaaaccctgaaggcgctcgagcttgcctctgaagccgctgatagcatcagt
gatggagatctggtcgatcgcatgattcacggctcacaacaacagtggagtttgatgccg
acacacgcagtcttcagttttgtcaggcctgcaagcttcgtgtctggcagcactgccggc
aaccagactcgctttacatcgtggctgggcaggaatagtagtcagaacaagctcatgcgt
ttagtaaaggagatccaagcccacatgcggctgcggtcgtctggtgataggcacgaagtc
cggcaacaatacatcccggtgctttggacggagatgattcagaagttgcagaaggagggt
aaagaatccgtgggcgagatcattgaactcatggacagctacttcttgaccaaggacgac
ttcgatgctatcatggagctgggtattggcccgatggatcaggagaaggtcaagattgag
acgcaggccaaggccaccttcacacgactttataaccaacaatcacatcccctgcctttt
atgaaggcgtcctcggttgtggcacccaagaaacaagccaaggagaagcctgacctcgaa
gaagccattgaggagtctgatgaaggcgaggtcgttgaggaagtcaaagaggaagacgag
gacgtggatctgtccaaggataagtatgtcaagcagccgaagaagaaggctgcacccaag
aagaaggctgcagcgaccggcaagggcaagaagcgagtgaaggaggagagcgacgacgat
gaagaggaggtcaagccaaaagcaaagggcaagggcaaagcggcggctaccaaggcgaag
aagtga

DBGET integrated database retrieval system