Ascochyta rabiei: EKO05_0006270
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Entry
EKO05_0006270 CDS
T09445
Name
(RefSeq) Structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arab03400
]
EKO05_0006270
DNA repair and recombination proteins [BR:
arab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
EKO05_0006270
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
AAA_21
AAA_27
AAA
ABC_tran
Motif
Other DBs
NCBI-GeneID:
62214986
NCBI-ProteinID:
XP_038797774
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All DBs
Position
10:complement(join(469354..469744,469796..470409,470457..470584,470634..470706,470754..472919))
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AA seq
1123 aa
AA seq
DB search
MPGLVRRGRKRPSPEEPDESSDSDLPTPVSVNGKRARYSRDASGTRNHAHAQNFSANGAY
AEDVFQPGSIVRVKLKNFVTYTAAEFHLGPSLNMVIGPNGTGKSTLVCAICLGLGWSSDN
LGRAKELSAFVKHGAAEAEIEIELARAGDMRTNPVVTRILRREDNKTVFLLNGKHSTKAA
VMDLCNRFAIQIDNLCQFLPQDRVVEFAKMKDTERLRATLGAAARPEMSEWHNQLKVLRE
EEKDLGAKRHDDDEHLKQLQALQNTTRGDVERWNQRQELAIKSEALEKVRPIIELRLRKS
EYKKVKDDFQAAKRGLDELNNEVEPIRQAGAAAQTYHDQVNQVVQRRKQMMDMVKKQAEK
KAQAISTEKQVIDGFQGQITGEMRSKQGRQQDIARFTKKVSDLERKRHERPVDYDQAAYQ
QRKDELRQEYSSAERRITDLRGIMSSIQARVQDFKAQRTAVQQQRDRLDTQSGKQSSLLQ
KISPETAKAWEWFEANKAQLPLKGEVYGPPILKCRITDPKYADAVDSQMRLGDVVAMTCT
NNDDQRLLLREMTGKDKLGLHGIYLRTSPKPLSSYQSPVAASDLAQYGFEGYLRDYITGP
DPVIAMLCDNVRLNRVAFASKAITDQQHAAASNSPIQAWVSGREVYRITTRKEYGVSSTA
VNHLKQGRFFVDQPVNSDEKLRLDEQLQELNREGNAMAAQHTEAKAELNQLLEKNKAVKE
QKDDIVREETAIRKAVAEWEALPRMIDQNKNELQQYIDLNAQTSDRIREIKAQSRLCSLK
IANLTLEYAKSVTEFRRLHENFVEAEIRLIEAASEVRALEKENKLVLERLRSKQVLVAQL
EQMANTMKEEVRQAHVRTQALLDDCTGEEKQIVLSYKDLPSVAELDDEIQSVNARLEMMS
GGSAQAVKTYETREQLIRKTQDSLDKHAAALREAQDKIKSIKDPFEKELDALIAKISDAF
AHNFAQIGCAGEVSVYKDDDDFNAWSIQISVRFREGESMSVLNANRQSGGERAVSTIFYL
MALQDLAQAPFRVVDEINQGMDPRNERMVHERMVDIACQERTSQYFLITPKLLSGLKFHP
KMKVHIINSGEHIPKSTTTKDEWNLKDMAKVALAVRGRVSAAA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcctcgtccggcgtgggcgaaagcgcccctcgcctgaagaaccagacgaatca
tccgactccgacctccccacgcccgtctctgtgaacggcaaacgcgctcgttacagccgt
gacgcgtctggcactcgcaaccacgcacacgcccaaaacttctcggccaacggcgcatac
gcggaggatgtatttcaacctggctcgatcgtgcgagtcaaactcaagaacttcgtcacc
tacaccgctgctgagttccatctggggcccagcctgaacatggttatcggaccaaacgga
acgggaaagagcacgctcgtgtgcgcaatctgtttggggctgggatggtcatccgacaac
ctgggaagagccaaggagctgagtgcgttcgtcaagcatggcgctgctgaagccgagatc
gagatcgaactggccagagcaggagacatgcggacaaatccagtcgtgacccgcatcttg
cgcagggaggacaacaagacagtgttcctcctcaacggaaagcactctaccaaggctgct
gttatggacctgtgtaatcgttttgctatccagatcgacaacctttgtcaatttttgcct
caggaccgggtcgtcgagttcgccaagatgaaagatactgagcgactacgggcgactctg
ggtgctgcagcccgtccggaaatgagcgagtggcacaaccaactcaaggtcctgcgcgaa
gaggaaaaggaccttggggccaagcggcacgacgatgatgaacatctcaagcagctccaa
gccctgcagaatactacacggggcgatgtcgaaagatggaaccagcgtcaggagcttgca
atcaagtcggaagccctcgagaaagtccggcctattattgaattgaggctgcgcaagtcg
gaatataaaaaggtcaaggatgacttccaagcagcgaagcgggggctggatgagctgaac
aacgaggtagagcccatcaggcaagctggggcagcagcgcagacttatcatgatcaagtc
aaccaagtcgtccagcgacgcaagcagatgatggatatggtcaagaagcaggcagagaaa
aaagcccaggcgatcagcacagaaaaacaggtcattgatggatttcaaggtcaaatcact
ggtgaaatgcgttctaagcaaggccgtcagcaggacatagctcgcttcaccaagaaggtc
tccgatctcgagcggaagcgacatgaacgacccgtcgattacgatcaagcagcatatcag
cagcgcaaggacgaattgcgacaggagtattcatcggccgaacgtcgcataacagatctg
agaggcatcatgtcgtccatccaagctcgagtccaggatttcaaagctcagagaacagcg
gttcagcaacagcgagaccgactcgacactcagagcggcaagcaaagcagtctgctacag
aagatctctcctgagacagccaaggcctgggaatggttcgaggcgaacaaagcgcaactg
cctctcaagggcgaagtctatggacctccaatcttgaagtgccgaatcacagaccctaaa
tatgcagacgctgtggacagtcagatgagattaggcgatgttgtggccatgacgtgcacc
aacaatgacgatcagaggctcttacttcgtgaaatgactggcaaggataagcttgggcta
cacggcatttacctcaggacgtcgcccaagccgttgtcttcctaccagtcacctgtggct
gcatcggatcttgcccaatacggattcgagggctaccttcgcgactacattacagggccc
gacccagtcattgcgatgctctgcgacaacgtgagactgaacagggttgcttttgcctca
aaggccatcactgatcagcagcacgccgctgcgtcgaacagcccgattcaggcatgggtc
agcggcagggaagtatacagaattaccacacgaaaggagtacggcgtgtcgtccactgca
gtcaaccatctcaagcagggacggttcttcgtcgatcaacccgtcaactcggatgagaaa
ttgcgtctcgacgaacaattgcaggagctgaatcgtgaaggcaacgcaatggcagcacag
cataccgaggccaaggccgagctcaaccagcttcttgagaagaacaaggcagtgaaagaa
cagaaggatgatatagtgagagaggagactgccatacgaaaggctgttgcggaatgggaa
gcccttcctcgtatgattgatcagaacaagaacgagttgcagcagtacattgacttgaac
gcacaaacaagcgaccgaatccgggagatcaaggcccagtcacgactgtgttcgctcaag
attgctaacctcactctggagtatgccaaatctgtcaccgagttccgtcgccttcacgag
aattttgtcgaggctgaaatccgtctgatcgaagctgcgtcggaagtcagagcgctcgaa
aaggagaacaagttggtcctagagcgactccgatcaaaacaagtgctggtcgctcagctg
gagcagatggctaacactatgaaagaagaggttcgacaagctcacgtcaggactcaggcg
ctactggatgactgcacaggggaggaaaaacagattgtgctttcgtacaaggacctccca
agcgtcgcagagctggacgacgagatccagtcggtcaatgctcgactcgaaatgatgtct
ggaggtagcgctcaggctgtcaagacatacgaaacccgcgagcaactaatccgaaagaca
caagactctctggacaagcatgccgcagccttgagggaggcgcaagacaagatcaaatcc
atcaaagatccgtttgagaaggaattggatgcactcatcgcgaaaatcagcgatgcattc
gcacacaacttcgcacagattggctgcgctggggaggtctcggtgtacaaggatgatgac
gacttcaacgcctggtccattcagatttcagttcgcttccgcgagggcgagtccatgtcc
gtcctcaacgctaatcgtcaatcgggtggtgagcgcgccgtctcgaccatcttctacctt
atggccctgcaagaccttgcacaggcaccgttccgcgtcgtcgacgagatcaaccagggc
atggacccgcgcaacgagcgcatggtgcacgagcggatggttgacatcgcttgtcaagag
cgtacgagccaatattttctcatcacaccgaagttgctctcgggtttgaaattccatcca
aagatgaaggtccacatcatcaacagcggtgagcatatcccgaagagtacgactacaaag
gacgagtggaacctcaaggacatggcaaaggttgcgcttgcggtcaggggacgtgttagt
gctgctgcctga
DBGET
integrated database retrieval system
