Ascochyta rabiei: EKO05_0006457
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Entry
EKO05_0006457 CDS
T09445
Name
(RefSeq) putative U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arab03009
]
EKO05_0006457
Ribosome biogenesis [BR:
arab03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
EKO05_0006457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
62215163
NCBI-ProteinID:
XP_038797951
LinkDB
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Position
10:complement(1067937..1069598)
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AA seq
553 aa
AA seq
DB search
MAAERGPKPKSIEANRKSQKGAPLDDEDARAVARFTEEATKQYGRGDRIRPKSVKDKKLR
SNLRLLENKNKQAAIEAKNVEILLENNEGLLETEHELERTYKVRQDEIKAAVGTETAKKG
FELRLDGLGPYDVCEYSRNGRDLLIAGRKGHVATFDWRDGKLGCELQLNETVRDARWLHV
SNQKNFAVAQKKCVYIYGGDGVELHQLKNHSEATHLEYLPYHFLLSSISTAGIIRYTDVS
TGQSLGELYTKLGQPTAFVQNPHNAILHVGHQKGLVTLWSPNSASPLVKLLPHHGPVRSL
AVDKSGTYMVSTSQDRRMSVWDIRMFKEIHTHHLRVPGTSLSISDRNLTAVGYGTQVNIY
KPEIFTHNPDLVLPTPYMAWGGEGISTGRVRFCPFEDILGIGHEKGFSSIIVPGSGEPNP
DTLEQGTNPFETSKQRRETEVHALLEKIQPEMIAIDPNFVGNLDLTSHEQRVKERDLDHK
EEDKIAKLKKRGRGRNSALRRYLRKSGSRNVIDEEKEHAREIVERRKERNVEKQKQLKQA
YGPALERFAKKGV
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgaacgagggccaaagcccaaatctatcgaggccaatcgcaaatcacaaaaa
ggcgcgccattagacgacgaagacgcccgagcagtcgcacgatttaccgaagaggcaact
aaacaatatggccgaggcgataggatcagaccaaaatctgtaaaggacaagaagctgagg
tcgaatctgcgcttgctggaaaataagaataagcaggcagcgatagaagcaaagaatgtg
gaaatcctgctcgagaataatgaaggactgctggaaaccgaacacgagctggaaaggaca
tacaaagttcgacaggacgaaatcaaggcagcagttggaacggagacagcaaagaagggt
tttgagctgcgactggatgggctggggccatacgatgtttgcgaatacagcagaaacggc
cgagatctgctaatcgcagggagaaaagggcatgttgcgacatttgactggagagacgga
aagctggggtgcgagttgcaactgaacgagacggtgcgagatgcaagatggctgcacgtc
agcaaccagaagaattttgccgtcgcacagaagaagtgcgtttacatctacggtggcgac
ggtgtagagttgcatcagctcaagaatcactccgaagccacacacctcgaatacctacct
taccacttcctcctctcttcgatatcgacggccggtatcataagatacacggacgtttcg
accggtcagtcgctgggagagctatacacgaagcttggacaaccgaccgcgttcgtacaa
aacccgcacaacgccatcctgcacgttggacaccagaaaggcctcgttacactatggtct
cccaacagtgcgtctccccttgttaagctcctcccacaccacggcccagtccgcagtttg
gcagtcgacaagtccggaacatatatggtcagcacatcgcaagaccgccgcatgtctgta
tgggatattcgcatgttcaaagaaattcacacacaccacctgcgcgtccccggcacgtcc
ctttccatctcagatcgcaacctcacggccgttggctacggcacacaagtcaacatttat
aagcccgagatcttcacacataaccccgacctcgtcttgcccacaccatacatggcttgg
ggcggtgagggaatcagcaccggccgcgtacgcttctgtcctttcgaggatattctgggc
atcgggcacgagaagggcttttcctccatcatcgtaccaggcagcggagagcccaacccc
gacacactggagcaaggcactaaccccttcgagacgagcaaacagcgccgcgaaacagaa
gtgcacgcactgctcgagaagatccaaccggagatgatcgccatcgaccccaactttgtc
ggcaacctggacctgacctcgcacgagcagcgcgtcaaggagcgcgatctggaccacaag
gaagaggacaagatcgccaaactgaagaagcgcggccgcggccgcaacagtgccctgcgc
aggtatctgcgcaagagcggcagccgcaatgtcatcgacgaggagaaggagcacgcgcgc
gagatagtcgagaggcgcaaggagcgcaatgtcgagaagcagaagcagctcaagcaggca
tacgggccagcgctggagcggtttgcaaagaagggcgtctag
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