Ascochyta rabiei: EKO05_0006561
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Entry
EKO05_0006561 CDS
T09445
Name
(RefSeq) Rhamnogalacturonan endolyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
EKO05_0006561
Enzymes [BR:
arab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
EKO05_0006561
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Gene cluster
GFIT
Motif
Pfam:
fn3_3
CBM-like
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
62215267
NCBI-ProteinID:
XP_038798055
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Position
10:complement(join(1369503..1370838,1370894..1371543))
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AA seq
661 aa
AA seq
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MRSTLATTALLSLASSTWALLKASENNSSLTISNERLVAGVSKTRGYINLLTLDGQNLLG
KEDGNTGVGPYLDCYCTPSGFWTPGRGTKVDYKLFNGTDASGVKYGGISMGETYAPTGQR
LEQYWFLREGETGLHTFSRVAYYNETTPFLRNLQELRTMFRPNHDPPLFTHFVTNEEFDA
PRPNTEGQVVVQDATWYLPNKDDSYVQGVGDYFTKYTFQDTWRKHKAHGMWADGSGSANG
TTYGAWLVHNTVETYFGGPLHSDLVVDGIVYNYISSNHHGDQTPNITNGFDRTFGPQYYH
FNKGGSLDELRADAEQYGLKPSWNAKFYDSIAKHVPNLVTAAGRGTFKAKIDLPKGARNV
LAVLAQTGVDFQDNVFDTKAYQYWAEVPSNGEASIDRVKAGSYRLTVYADGIFGDFTQDD
IKVAAGKETNVKAKWNPESAGTELWRIGTPDKSSGEYRHGYTQSPTHPLLTDEYRLYWAD
YDFVTEFPDGVSYKVGRDDPSKALNYVHWSIFGGKANYERPEPVYENINNWTILFDTKAQ
QLKNKKTATFTVQLAGAKSAAGNTDIYNASEPYSNLPYTVNVNGKDLQPWVIPYHHSSSC
AVRSAVVCYNIANKFVFDAKLLKEGENTFVLSLPYGGKNYESAVLPEALYVQYDAMRLEV
K
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccactcttgcgacaacagccttgctgtcgttggcatcgtcaacatgggccctg
ctcaaggcttcggagaacaacagcagtctgaccatctccaatgagcgtcttgtcgcaggg
gtcagcaagacccgtggctatatcaatctgctcacacttgacggacagaacttgctgggc
aaggaggatggcaacactggtgtagggccatatctcgactgctactgcactccttctggg
ttctggacgcctggtcggggcaccaaggtcgattacaagctgttcaacggtacagatgcg
tcaggcgttaagtatggcggcatcagcatgggcgagacatacgcgcctacgggccaacgt
ctggaacagtactggttcctgagagaaggtgaaacgggcctgcacacgttcagtcgcgtt
gcttactacaacgagaccacgccgttcctgcgcaacctccaggagctcaggactatgttc
aggcctaatcatgatccccccctgtttactcactttgtgaccaacgaggagtttgacgct
cctagaccaaacaccgagggtcaggtggttgtgcaagatgcgacttggtacttacccaac
aaagatgactcttatgtccaaggcgttggtgattacttcaccaaatacacatttcaggat
acttggagaaagcataaagcacatgggatgtgggcagacggatccggcagcgctaatggc
acgacatacggcgcatggctggtgcacaacacggtcgagacttactttggcgggccgttg
cattcggatcttgtggtggacggtatcgtctacaactatatcagcagcaaccaccatggc
gaccagactcctaacatcaccaatggttttgacaggaccttcggaccgcaatactaccat
ttcaacaagggtggctctctcgatgagctccgtgccgatgctgagcagtacggtcttaaa
ccgagctggaacgcgaaattttatgactccattgccaagcatgttcccaatctggtcacc
gcagctggccgtggtacgttcaaagccaagatcgatctcccaaaaggtgctcgaaacgtg
ctcgctgttcttgcacagaccggcgtagacttccaggacaacgttttcgatacgaaagcc
tatcagtactgggccgaggttccctcgaacggcgaagcgagcattgatcgcgtcaaggct
ggcagctaccgcctcacagtatatgcggatggtattttcggcgacttcactcaagacgac
attaaagttgcggcgggaaaggaaaccaacgtcaaggcgaaatggaatcctgaaagcgct
ggcactgaactttggcgcattggcacacctgacaagtcctctggggagtatcgtcacggc
tacacgcagtctcccacgcaccctctccttaccgacgaatataggctctactgggccgac
tacgacttcgtgacagaatttcctgatggtgtctcctacaaagtcggtcgcgacgacccc
tccaaggcgctcaattatgtccactggagcatttttggtggcaaggcgaactacgagcgt
cctgagcccgtctacgaaaacatcaacaactggactatcttattcgatactaaggcccag
cagcttaagaacaaaaagactgcaaccttcacggtccagcttgccggtgccaagtctgca
gcgggcaacacagatatctacaacgcaagcgagccatactccaacctcccttacactgtc
aatgttaatgggaaagacttgcagccatgggtcatcccctatcaccattccagctcttgt
gctgttagatcagctgttgtctgctacaacatcgcgaataaatttgtattcgatgctaag
ctgctcaaggagggcgagaacacgtttgtactgagtctcccatacggtgggaagaactac
gagagcgctgttctgcctgaggctttgtacgtgcagtatgatgcaatgaggttggaggtg
aagtag
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