Ascochyta rabiei: EKO05_0006749
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Entry
EKO05_0006749 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K26109
nuclear exosome regulator NRDE2
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arab03019
]
EKO05_0006749
Messenger RNA biogenesis [BR:
arab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
EKO05_0006749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
62215461
NCBI-ProteinID:
XP_038797288
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All DBs
Position
11:complement(join(192159..195246,195599..195684))
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AA seq
1057 aa
AA seq
DB search
MVVAAGLGGSAGLRSQSSKKTSALGDFLRMSASVPRFTSFRPKPKPLAPPPPPPPEKPRD
QESKHKHHTSSRHRVKTPPPRATQDRKPHANAQTSTSRACFSDRRGDADIIKYGTLNPYD
VPTYRRCGYGHVLGLSGQKMDREHSTEKNICMTPLVRQRQTRWLTDRHAIKASKRALRLV
KVAEASPFDQEAAFISLSATRKRKRVPDADCESDRNLAPELDYRGMAEKLDPDKADDPDT
YYESDTEAASAHSETTKRNADLIRATRDNPHDLQAWLDLVQHQEPMMKLDRAVEELTTSD
KQNLADVRIATYKEALRKVGDNEASQIELHTKLLSEAQAHWDSEKLAAKWQHVLSKHPRS
VVLWFGYLDFAQSTFTKFKYEDCRLLVREALAALGTQSPSNHSATPEARLHLLARLTRMA
QEAGYQELALAIWQAIFEFSLLTPPHLTADKLQQFEEFWESEAPRIGEPGSKGWRHTSID
DAAPPVCSITLASPGPSGRVWEGFQEREVEHMSKLRYPGRSTDDVAEEDPFHAIFFSDLK
EYVTAVPTVPAELLVDAFLSFCGLPGLASTTPAEAWRADPFMRNRASYSNTTAEMDSGGL
LYQDALSRYSQCPLASFQMTNHLLVQQPFSLDTSRLSPDFVRNLLKLLATNLPEHELISE
YLLAFEYKHFPDEVAKTAKQLLKERPSSLRLYNMYGLMESHKGNSAKANQVFGAALNINT
ASADGLELLSSYIWQALLTGDTGEALWRIVRHEGQLPHVRTMQPDSHLLEKTRTALQVSL
EDTLVKKDYASAVLNTALLALLTYLSRKCDAMAALEIHNNLISWFASHTLSSSAHAEVHA
QALARLLTYHVTHTPIMKPALLRTALEPLIATFPDNTILLSTYAANEARFTIDDRVRGNM
HRVLNTSSAASVVTWAFAVHHETLRGEMAGSTSHSIRALYKRATDLDASGVHCPALWRMY
LLFEVQQLIKEQTLRPNRRPRRDNKKSKWESRVEEAENRVRDTFYQGLKMLPWCKDYIML
AFTDAREVFTEEELWRLYRVMMEKELRVHTELDEPDT
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtggcggccggtcttggtggcagcgctggcctgcggtcgcaaagctccaaaaag
acttcggcgctaggcgactttctacgcatgagtgcgagcgtgcccaggttcacaagcttt
cgtcccaagcccaagccgctagcaccaccaccaccacctcctccggagaaacctcgggat
caagagagcaaacacaagcaccacacatcatccaggcaccgagtcaagacaccgccgccg
cgcgcgacgcaagaccgcaagcctcacgccaatgcacaaacgtccacgtccagagcctgc
ttcagcgaccgccgaggtgacgccgacatcatcaagtatggcaccctgaacccctacgac
gtgcccacctatcgccgctgcggctacggccatgtccttggcctttccggtcaaaagatg
gaccgcgagcactccaccgagaagaacatctgcatgacaccgctcgtgcgccaacgacaa
acccgatggctcaccgacagacacgccatcaaagcgagcaagcgtgcactgcgtctcgtc
aaagtcgccgaggcttctcctttcgatcaagaggctgctttcatttcgctctctgccacc
cgcaaacgaaagcgagtccccgatgctgactgcgaatctgaccgaaatctggctcccgag
ctggactatcgtggcatggccgaaaagctcgaccctgacaaagctgatgatccagacacg
tactacgagtccgacacggaggccgccagcgcccactcggagaccaccaagaggaatgct
gacctcatccgagccacccgggacaacccacacgacctccaggcctggctagacctggtc
cagcaccaggaaccgatgatgaagctggaccgtgccgtcgaagaactaacaacatccgac
aagcaaaacctggctgacgtgcgcatagctacctacaaagaagctctgcgcaaggttggc
gacaacgaagccagtcagatcgagctccacacgaagctcttgtcagaagcgcaggcgcac
tgggacagtgagaaactcgcggccaaatggcaacatgtgctcagcaaacatcctcgcagt
gtcgtgctctggttcggatatcttgactttgctcaatccacatttacaaagttcaagtac
gaggactgtcgcctacttgtccgcgaagcccttgcagcactaggtacacagagcccgtca
aatcactcggccaccccggaagctagactgcacttgttggcgcgtctgactaggatggcc
caagaagccggctaccaggagcttgcattggccatctggcaggccatcttcgagttcagt
ctactaaccccaccccatctcaccgcagacaagctgcagcagtttgaagaattctgggag
agtgaggcaccccgcatcggcgagcctggcagcaaaggctggcggcatacatcgatcgac
gatgcggctcctcccgtgtgctcaatcaccttggcatcacccggtccctcaggtcgtgtg
tgggaggggtttcaagaacgtgaagttgaacacatgagcaagcttcgctaccccggccgc
tccacagatgacgtcgccgaagaggacccgttccacgcaatcttcttctcggacctgaag
gaatacgtcaccgccgtacctacggtcccggctgagctgctggtagacgcgttcttgtct
ttctgcggattgcctggcctggctagcactacccctgctgaggcctggagggccgatcca
ttcatgcggaacagagcgtcttactccaacaccacagccgagatggactcgggaggtctc
ttgtaccaggatgcgctctcgcggtactcccaatgtccacttgctagtttccaaatgaca
aatcatctcctagtccagcagccgttctctctcgacacctccaggctcagtccggacttt
gtcaggaacctcctaaagctattggcaacaaaccttcctgaacacgagctcattagcgag
tacctcctggcttttgagtacaagcattttccagatgaggtggccaagactgcaaaacag
ctgcttaaggagcgaccttcgagtctccggctctacaacatgtatgggctgatggaaagc
cacaagggcaactccgccaaggccaaccaagtctttggcgccgcactcaacataaacact
gcttccgcagacggcttggagctcttgagtagctacatctggcaggctctactcacagga
gatacgggtgaggcgctctggcgaattgtacgacacgagggccagctcccacacgtccgg
acgatgcagcccgactcccatctcctcgagaagactcgcactgcgttgcaggtttcactc
gaggacacactcgtcaagaaagactacgcatcggcggtactcaacacagccctccttgcg
cttctcacttatctttccaggaagtgtgatgcgatggctgccttggaaatacacaacaac
ctcatctcgtggttcgcctcacacacgctctccagctcagcccacgcggaagttcacgca
caagccctggcgcgcttactcacctatcacgttactcacaccccgatcatgaagcccgcg
cttctccgcacagccctcgaaccgctgattgccacattccccgacaacacgatcctcctg
tcgacctacgccgccaacgaagctcggttcaccatcgatgaccgtgtgcgcggtaacatg
caccgcgtgctgaacacctcgtctgctgcgagtgtcgtaacatgggcttttgcagtccat
cacgagaccttgagaggcgagatggcaggctctacttcacactctatacgtgctctgtac
aagcgtgccacagatctcgacgccagcggtgtgcactgtccggccctttggaggatgtat
ctactgtttgaagttcagcaattgatcaaggagcagactctgcggccgaacaggagaccg
cgtcgggacaacaagaagagcaagtgggagagccgagtggaagaggccgagaatagggtt
agagacaccttttaccagggcttgaagatgttgccgtggtgcaaggactacattatgcta
gcattcaccgacgcaagggaagtgttcaccgaagaggagctgtggaggctgtacagggtg
atgatggagaaagagctgagagtgcacaccgagcttgacgagccggacacttga
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integrated database retrieval system
