Ascochyta rabiei: EKO05_0006851
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Entry
EKO05_0006851 CDS
T09445
Name
(RefSeq) Small subunit processome complex component
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
arab
Ascochyta rabiei
Pathway
arab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EKO05_0006851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arab03009
]
EKO05_0006851
Ribosome biogenesis [BR:
arab03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
EKO05_0006851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltr_RsmB-F
PCMT
Motif
Other DBs
NCBI-GeneID:
62215553
NCBI-ProteinID:
XP_038797380
LinkDB
All DBs
Position
11:complement(join(842902..843631,843685..843921,844112..844128))
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AA seq
327 aa
AA seq
DB search
MAFTPRGGRGGGDRGGRGGFTPRGGRGGGFGDRGGRGGGRGGFGGRGGSRGGSRGGFGDR
GGRGGGRGAPRGGARGGRGGARGGAKTIVEPHRHAGVFVARGKEDLLVTKNLTPGESVYG
EKRISVGAEKAEGSDEAAPSAIEYRVWNPFRSKLAAGILGGVDNIYMGPGSKVLYLGAAS
GTSVSHVADIVGPEGTVFAVEFSHRSGRDLINMATHRTNVIPIVEDARHPLKYRMLVGMV
DCIFADVAQPDQARIVGLNAGLFLKVGGGIVISIKANCIDSTAAPEAVFAQEVAKLREMG
IKPKEQLTLEPFERDHAMVVGVYERAK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggctttcacacccagaggcggacgtggcggtggtgaccgtggtggtcgcggaggcttc
actcctcgcggtggacgtggtggtggcttcggcgaccgtggtggccgtggcggcggtcgc
ggaggctttggcggtcgtggaggcagccgtggaggcagccgtggaggttttggtgaccgt
ggtggccgtggcggcggccgtggtgctcctcgtggcggtgcccgtggtggacgaggtggt
gcccgtggcggagctaagaccattgtcgagccccatcgccacgctggtgtcttcgttgcc
cgcggaaaggaggatctcctcgtcaccaagaacttgacccccggcgagagcgtctacggc
gagaagcgcatcagcgttggtgctgagaaggctgagggcagcgacgaggctgccccctct
gccatcgagtaccgtgtgtggaaccccttccgctccaagttggctgcaggtatcctcggt
ggtgtcgacaacatctacatgggccctggctccaaggtcctctacctcggtgccgcctcc
ggtacctccgtgtcccacgttgccgatatcgtcggccctgagggaactgtcttcgctgtc
gagttctctcaccgctccggtcgtgatctgatcaacatggccacccaccgcacaaacgtc
atccccatcgtcgaggatgctcgccaccccctgaagtaccgtatgctcgtcggcatggtc
gactgcatcttcgccgacgttgcccagcctgaccaggcccgtattgtcggtctcaacgct
ggtctcttcctgaaggttggtggtggtattgtcatctccatcaaggccaactgtatcgac
tcaaccgccgcacctgaggccgtcttcgcccaggaagttgctaagctgagggagatgggc
atcaagcccaaggagcagctgactctcgagcccttcgagcgtgaccacgccatggtcgtt
ggtgtctacgagcgcgccaaatag
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