Ascochyta rabiei: EKO05_0007008
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Entry
EKO05_0007008 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
arab
Ascochyta rabiei
Pathway
arab04138
Autophagy - yeast
arab04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
EKO05_0007008
04148 Efferocytosis
EKO05_0007008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arab04131
]
EKO05_0007008
Membrane trafficking [BR:
arab04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
EKO05_0007008
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS3_N
DUF2385
VPS3_C
Motif
Other DBs
NCBI-GeneID:
62215706
NCBI-ProteinID:
XP_038797533
LinkDB
All DBs
Position
11:join(1262029..1262158,1262224..1264820,1264872..1265669)
Genome browser
AA seq
1174 aa
AA seq
DB search
MADAAPPPPLQDGPFVLRKLVSDLPLSADGQHSDARITCVEIWDGNLYVGTSAAELLHFV
LLPPDADDPSAEPTAIVASRLEPPHNDPTGPGVQQILVLPRICKACVLCNNTLSMYSLPE
LSPDSTFKPISCLWVGGVDLNEAEGDDEGVVVVIGLKKRLRLVQITESSPPKAVKSIEYG
ACLLSVRRDAFSCAADSHSYALLDVMHQQKIGLFPISSLDPNAGHVGGAAETIATVPHPP
SRSLSSASAQPSASEQRGHNRSTSLNIMGIGSAPSSRTASPPPPPQRHGFNVPDSPSPTV
SPAPAHHPARSPARPAAGEATEGTAAEKPLPPPPGEAIPQLELQKAPQPPPFVPLRPHIA
SPTPNEFLLTVGTTPSEQGVGMFVNLDGDMCRGSIQFSSYPDALLVDGSGIDWTASMGPD
MDAEEGYVLAAVHRGAGDELEYGVEIQRWDVDPGAGEATKDWLNLGALGLSTPDGTHIPT
PLGMRTIVQPYDLVLPQIGAKLTVQRLQLPSKTGVDTPERAAPVHTAQEKADLEFTERLS
KLKSRNVIWAGNQIWWIVRNPLVTRLDSRLEQATFATVDGEWRLHPHRNPVERVLGDIRG
QDPRNESEYLSLIYIRQKASVLLFMDVVLRTRINIIIFENEKRITEQALIEGEVDPRIVL
SLLPVLNKEVVQGPEGIQVSGGITSIIEQFLRQNDLSTMPTDVNGPFGDNLLHFVKRYLQ
FWRRRKGMASVTSDPFVFSTVDAALLHILLLLDQGSPNGTSSTGMYRAELNELVDREVEC
FDRAVELLEQFNRLYVLSRLYQSNCKASAKASKVLATWKRILDGEEDAGGAFVDGENELR
KYLARIRDQSLVEEYGAWLANRNPKLGVQIFADDHSRVKFEPTSAVELLKEKAPGAVKEY
LEYLVFGKKHTRYVNELIAFYLDTVIHELETNSESRDTLSQTYETYRILEPPKPTYHQFI
TDNAIPAEWWQARLRLLQLLGSNQPTTSSYHVSTILARLEPYEEELVPEMIILHGRQEQH
QEALRLLTHGLGDFDTAISYCLYGYSSIFRPTTSGTLPIPQSELPSRLEQSRLFNFLLQE
FLNIEDMSQRVDRTGELLERFGGWFDIGDVLAMLPNEWSVDIFSGFLINSLRRLVREKAE
SDIVKALSDAQNSQTSVELVEKREAAKPVVERVG
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgcagctcctcccccgcccctgcaggacggcccctttgtcctccgcaagctc
gtctcggacctgccgctgtccgcggacgggcaacacagcgatgcgcgcatcacctgcgtc
gagatctgggacggcaacctctacgtgggcacctcggccgccgagctcctccacttcgtc
ctgctcccccccgacgccgacgacccttcggcagagcccaccgccatcgtcgcctccagg
ctcgagcccccgcacaacgaccccaccggccccggcgtgcagcagatcctcgtcctcccc
cgcatctgcaaggcatgcgtcctgtgcaacaacaccctgtccatgtactcgctgcccgag
ctgagcccggactcgaccttcaagcccatctcttgcctgtgggtcggcggcgtcgacctg
aacgaagcagagggcgacgacgagggcgtcgtcgtcgtcattggcctgaagaagaggctg
cgactcgtccagatcaccgagagctcgccgcccaaggcagtcaagtccatcgagtatggc
gcatgtctgctctctgtcaggcgcgacgccttctcgtgcgccgctgacagccactcgtat
gcgctgctggacgtgatgcaccagcagaagattggcctgttccccatctcgtctttggat
cccaacgctggccatgtcggaggcgctgccgagacaatcgctaccgtgcctcaccccccg
tcgagaagtctgtcgtccgcgagcgcacagccatccgcgagcgagcagagaggccacaac
cgaagcacgagcctcaatatcatgggcataggcagcgctccttcttcacgaaccgcaagc
ccaccacccccgccacaacgccatggttttaatgtaccagactcaccatcaccgaccgtc
tcgccagcaccggcccaccaccccgctcgctctcccgcacgccctgccgcaggagaagcc
acagagggcacagctgctgagaagcctttaccgcccccgccaggagaggccatcccgcag
ctggagctacagaaagctccacagcccccgcccttcgttcctctaaggccccacattgca
tcaccaaccccaaacgagttcctgctcaccgttggcaccaccccatccgaacagggcgtc
ggcatgttcgtcaacctggacggcgacatgtgccggggaagcatacagttcagcagttac
ccggatgcactgctagtcgacggctcgggcatagattggacagcctccatgggccctgac
atggacgccgaggaaggctacgtgctggctgcggttcaccgaggggctggtgatgagctt
gagtacggcgttgagatccaaagatgggacgtggatcctggtgcgggcgaagcaaccaaa
gattggctgaacctcggcgcactaggtctctcgacaccagacggtacccacatcccaaca
cccctgggtatgcgtaccatagtccagccttacgaccttgtccttcctcaaatcggggcc
aagcttactgtgcagcggctgcagcttccctccaagacgggtgtagacacgccagagaga
gcagcgccagtccacacagcgcaagaaaaggcagacctcgagtttacagagcggctgtcc
aagctgaagtctcggaatgtgatatgggccggcaaccagatttggtggattgtccgcaac
cccctcgtcacacgcttggactcgcgtttggagcaagctacgttcgcaaccgtcgacggt
gaatggagattacacccgcatcgcaacccggtggagagagtacttggcgacatacgaggg
caagatccccgcaacgagtccgagtatctcagcctcatctacatacgtcaaaaggcatcc
gtactccttttcatggacgtcgtccttcgcacaaggatcaacatcatcatcttcgaaaac
gagaaacgcatcaccgaacaagctctcatcgaaggtgaggtggatccacgtatcgtgtta
tcgttgctaccggtcttgaacaaagaagtggtccagggaccggaaggcatccaggtctct
ggtggtataacatcaatcatcgagcagttcttgcggcagaatgacctgtcgacaatgccg
acagacgtcaacgggccttttggtgataacctgctccatttcgttaagaggtatctgcag
ttctggagaaggaggaagggcatggcaagcgttacgagtgatccgttcgtcttcagcacg
gttgacgctgcactgttgcatatcttattattactggatcaaggcagccccaatggcacg
tcaagcacaggaatgtatcgtgccgagcttaatgagctcgtcgaccgggaggtcgagtgt
tttgaccgagctgtggaactactcgaacagttcaatcggctctacgtgcttagtaggctg
tatcaaagcaactgcaaggcgtcagccaaggcttcaaaggtgctagccacatggaaacgc
atccttgatggcgaggaagatgcgggtggcgcctttgtcgacggcgagaacgagctgcgc
aagtatcttgcacgcattcgggatcagtcgctagtggaggagtacggcgcatggctcgcg
aatcgcaaccccaagctcggtgtacagatctttgccgacgatcacagtagagtcaagttc
gagcccacaagcgctgttgagctgctgaaggaaaaggctcccggtgctgtcaaagagtac
ctggagtacctcgtctttggcaaaaagcacacacgctatgtgaacgagttgattgcgttc
tatctagacacagtcattcacgagctcgagaccaattccgagtcccgtgacacattatcc
cagacctacgagacctaccgcatcctcgagcccccaaaacccacctaccaccaattcata
accgacaacgccatcccagcagaatggtggcaagcacgcctacgcctcctccaactcctc
ggctccaaccagcctactacctcctcctaccatgtcagcaccatcctcgcacgcctcgag
ccgtacgaggaagaactggtgcccgagatgatcatcctgcacggccgccaggaacagcat
caagaagcgctacgcctgttgacgcacggtcttggcgacttcgacacagcgataagctac
tgtctgtatggatacagttccatcttccgccccaccaccagcggcacgctaccgatccca
caatccgagctcccgtcgcgcctcgagcagtcgcggctcttcaactttctcctacaagag
ttcctcaacatcgaggacatgtcgcagcgtgtcgacagaaccggcgagttgctggaacgc
ttcggcggctggttcgatatcggcgacgtgcttgccatgctgcccaacgagtggagtgtg
gacatcttctccggcttcctgatcaacagcctgcgaaggctagtgagggagaaggcagaa
agcgacattgtcaaggcgctcagcgatgcgcagaacagccagacgagcgttgagctggtc
gagaagagagaggctgctaagccggtcgtcgagagggtcggttga
DBGET
integrated database retrieval system
