Ascochyta rabiei: EKO05_0007224
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Entry
EKO05_0007224 CDS
T09445
Name
(RefSeq) RING-type E3 ubiquitin transferase
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
arab
Ascochyta rabiei
Pathway
arab04120
Ubiquitin mediated proteolysis
arab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
EKO05_0007224
04120 Ubiquitin mediated proteolysis
EKO05_0007224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arab04121
]
EKO05_0007224
Enzymes [BR:
arab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
EKO05_0007224
Ubiquitin system [BR:
arab04121
]
Ubiquitin ligases (E3)
U-box type E3
EKO05_0007224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
NPV_P10
Motif
Other DBs
NCBI-GeneID:
62220694
NCBI-ProteinID:
XP_059492980
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All DBs
Position
12:complement(join(398785..399697,399753..401989,402047..402115))
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AA seq
1072 aa
AA seq
DB search
MADHEMTDPSPQEQDTAMSDADKIRAKRLAKLGGPPTSRPSCTAPEASGSAPASGTSSPK
PATTQPPRTSDLGSQSDGKIEQEPASRINIKPAVSASTPAPPPPAPKTQDVSIEAWTDRT
ISGIFRITLEEGRTQDPHGHKVYFALSSKQDLEDEGRPLRFTTDMLDSVVLEAASSHMHG
NALEYLLGCWKRVAKQTKSIANKNDPNYEIVRELRRICFNYAIFAATMPDMFGEEAPLEN
ALTDRLLLGPEDDRGICFDFLQEACTRAEDDDTAKEALVAAVEDLSRRLARTSMNSDYKP
YMLALRSLIRFPPLVTALVRSDTFLPADIEAQSIETKTLLGPFFRLSPMQGEVAVNYFSG
AAGGDKGLIANAQRALRMTLQTHQDELFDIANTFIKNKDSRESMLNWFALTVNKNHKRRA
LQVDAKTVSTDGFMVNVTVVLDRLCEPFMDATFAKIDKIDIGYLRRAPRIDIKDETKINA
DEKTSDEFYSNKLDGTSNFISEVFFLTVAAHHYGTEAANAKLSSLQKDVKWLKKELEKFE
TERHKYASNPIQLKLFDNHVKKIKDQIERGTCTSYAIIGVLGDEVMQSRSMQLMRYVIVW
LLRIVSGTDFPRQELQLPLPNEQSLAFRCLPEYFVEDIVGNFKFITRMMPHIITSTQCEE
LVKICIVFLRSSEYIKNPYLKSGLVTILCHGVWEIQGRSKGVLGDTLFGNKFAMKHLLHA
LMQFYNECESTGAHTQFYDKFNIRYEIFQVIKCIWPNPVYRDNLATEARVNLEFFVQFVN
LLLNDVTFVLDESFTAFTQIHDTSKELKSDPNMDQAVRQEKEEKLTAAQSKAKSYMQLTN
ETVAMLKLFTEALADSFTKKEVVVRLAHMLDYNLEALVGPKKSSLKVENPEEYGWNPRQM
LAELTDVYLNLRNRQSFIDAVATDGRSYRPEYWIEAHKIMSRFYLKDDQQLQQWEAMARE
ISASKEAADMDEADLGEYPDEYTDPILATLMEDPVILPTSKNTVDRSTIQSHLLSDPHDP
FNRSPLKIEDVIPNDALRKEILTWKAELLAKKRAERTAASAAAAAAEPMETS
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcacgaaatgacagacccttcgccgcaggagcaagacaccgccatgtctgac
gccgacaagattcgagccaagcgcctggccaaacttggaggcccacccacctcacgacca
tcctgcacagcacctgaagcctcaggctcagctccagcgtctggcacctcgtcaccgaag
cctgcaaccacccagcctccacggacgtctgatttgggctcgcagtcagatggcaagata
gagcaggagccagcgtcgcgcatcaacatcaagccagctgtcagcgcgagcactcccgcc
ccgccgccacctgcgccgaagacacaagatgtcagcatcgaagcgtggacagaccgcaca
atcagtggcatcttcaggataaccctagaagaagggcggacacaagatccacacggccac
aaggtctactttgcattgagttcaaagcaagatcttgaagacgaaggccggccgctccgg
ttcactaccgatatgctggactcggttgtgttggaagctgcatcgagccatatgcacgga
aatgcgctggaatatctccttgggtgctggaagcgagtggcaaagcagaccaagagcatt
gccaacaagaacgatccaaattacgagattgtgcgagagcttcggcggatatgcttcaac
tacgccatcttcgccgccaccatgcctgacatgtttggtgaagaagcgcccttggagaac
gcgctgaccgaccgcctgctgctcggacctgaagacgatcgcggcatctgcttcgacttc
ctccaagaagcctgcacccgtgctgaggacgacgacactgctaaagaggcgctggtggct
gctgtggaagacttgagccggcgattggcgagaacatccatgaacagcgactacaagcct
tacatgctggcacttcgtagcctcatccgcttcccgccactcgtcactgctctggtgcga
tcagacacgttcttacctgctgatattgaggcacagtccattgagacaaaaactctcctt
gggcctttctttcgactgtcccccatgcagggcgaggtcgcggtgaactatttctctggt
gcagcaggcggagacaagggtctcattgctaacgcccaacgggctctccgtatgacacta
caaacccaccaggacgaactattcgacatcgcaaacacgttcatcaagaacaaagactcg
cgagagtctatgctcaactggttcgcccttactgtgaacaagaaccacaagcgacgagct
ttgcaagtcgacgctaagactgtatcgacagatggcttcatggtcaacgttaccgttgtc
ctggaccgactttgtgagcccttcatggacgcaacctttgccaagattgacaaaatcgac
atcgggtatttacgacgagcgccgcgtattgacatcaaagacgagaccaagatcaacgcc
gacgagaagacgtccgacgagttctacagtaataagctggacgggaccagcaacttcatc
tctgaggttttcttcctgactgtggccgcccatcactacggtaccgaggctgccaacgcg
aagctttcgtcgttacaaaaggacgtcaagtggcttaagaaggaactcgagaagttcgag
acggaacggcacaagtatgcgtcgaacccgattcagctgaagcttttcgataaccacgtc
aagaagatcaaagatcaaatagaacgaggtacatgcactagctacgccattataggcgta
cttggagacgaagtcatgcagtcccggtccatgcaactcatgcgatatgttatcgtctgg
ttgctacgcatcgtttctgggaccgatttccccaggcaggaattgcagctgcctcttcct
aacgaacagtctctggcgttccgctgtctccctgaatactttgttgaagacatcgtcggc
aacttcaagttcatcacccgcatgatgccgcatatcatcacttcgactcagtgcgaagag
cttgtaaagatctgcattgtcttcctccgaagctcagagtacatcaagaacccatacttg
aagtctggtctcgtaaccatcctctgccacggagtttgggagatccaaggccgctcaaag
ggcgtacttggtgacacgttattcggaaacaagtttgccatgaagcacttgctgcatgcg
ctgatgcagttctacaacgagtgcgaaagcacaggggcacacacgcagttctatgacaag
ttcaacataagatatgagatcttccaggtaatcaagtgcatctggccaaacccagtctac
cgtgacaaccttgccacagaagcacgtgtcaaccttgagttcttcgtgcagtttgtcaac
ttgctactgaacgatgtcactttcgttcttgacgagtcgtttactgccttcacacagatc
cacgatacctcaaaggaactcaagagcgacccgaacatggaccaggctgtgcgtcaggag
aaggaggagaagcttactgctgcgcagagcaaggccaagagctacatgcagctgaccaac
gagacggttgctatgttgaagctgtttaccgaagcgctcgccgactcgtttaccaagaaa
gaggttgttgttcgacttgcgcatatgcttgactacaatctagaagccttggttgggcct
aagaaatcgagcctgaaggttgaaaatcccgaagaatacggatggaatcctcgccaaatg
ctggctgagctgacagacgtctacctcaacctacggaataggcagtcatttatcgatgct
gttgccacagatggacgctcctaccggccggagtactggatagaagcgcacaagatcatg
tccaggttctacctgaaagatgaccagcagcttcaacagtgggaggccatggcgcgtgaa
atcagcgcttcaaaggaagctgccgacatggacgaggccgacctgggagagtatcctgac
gagtacacagatcctatccttgcaacgctgatggaagaccctgtcatcctgcccaccagc
aagaacacggtcgaccggagtacgatccagagccatctgctgagtgatccgcacgaccct
ttcaatcgtagtccgctgaagattgaggacgttattcccaacgatgctctcaggaaagag
atcttgacctggaaggcagagctactggcgaagaagagagctgagcgtaccgccgcgtcg
gccgcagcggccgcagccgagcccatggagacgtcgtag
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