Ascochyta rabiei: EKO05_0007232
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Entry
EKO05_0007232 CDS
T09445
Name
(RefSeq) mediator complex subunit
KO
K15147
mediator of RNA polymerase II transcription subunit 5
Organism
arab
Ascochyta rabiei
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arab03021
]
EKO05_0007232
Transcription machinery [BR:
arab03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
EKO05_0007232
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med5
Motif
Other DBs
NCBI-GeneID:
62220686
NCBI-ProteinID:
XP_059492981
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All DBs
Position
12:complement(join(420667..421835,421890..422252,422299..422470,422521..423027,423077..423139,423187..423452,423530..424142))
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AA seq
1050 aa
AA seq
DB search
MDSMVKEWTVFLDRCLNQRVPADLFDAATTQLYRTSPLPGRKLAGLLLKPRSARANSVDP
RVIVYLERLLALKRVDASDVLSATFYYSKDRLPKNDGHLTENEPRWHNASELEEVVCHRL
HKAFAAEDRPTNNSEGMQTLIVVTRWMQAMVTSHTSDTMMQAMAGISQQPQQQSINVREA
LGVLVVGLIENSKILLILSHHTATDLRKRLAQSLASFIPFLSHNSLGSQSSLEIANRLEM
SQKQHSLYEKPANIEGVPNEHANLEVAALQLEAVMDLPLVSTRAGLYVFVNSLLVARPLT
DEFTIINYLHSRYKIDAQNMAADLITASFDVLANAMYRSEPSSTMFLLKSFLINKVPVLL
SQLSGSIYPMTPEICITQALSHVDPNAFPAFSQGFDDIMGGNNSLSDVRQDFLNACALHG
HIATNTVERLLGEPPIQGPPATKYDKKTLLDQCKNNFDKVNAYIDEMENLDGNAGAIVGA
ITEFIAHLCETQVTMYLKHICNLLSKKPQCLDVMLQFTSPASILRPLCQFLDEWHYDSDQ
GEYQPVYDEFGAILVLIMAFVYRYDLTHHDIGINHESFIARLIERGNHSVAPDNLTEEQG
RHLASWLKGLYDSGNEGLSNDVFASCRPQDFYLIVPTFFSQTVMACSAGVLSLETVKGGL
EYLGETFLLPSLIGGLSWMASHALKQTHNDLDAMMRIFHQAILSVPSSGDAQAMHSTIIA
MVSSRLEKCFRTLQRRDPHRTNIEPLLQAIKGNAHYGRSTYASIRELEQWTNAPNSTLNT
ALRHTIQQLAQWASTAAINPNPPSYTHRQVYAASNMLGVYQTVRAIVDEVKAQTEAGNGA
AALDIGVSIICAPTVEDSPIPVDWIGSSISAPAPPRTRINLREMLKHLFDNALSLITTDP
SSAEAIVRLHRRVEAQLASVGQAGLQAPVISLPSVSMDSMQAQNISDDINKAMEDAATAS
LANDMEIPSMDKKALERSMEELTGPEGLNLSGIGMETGTGMASDMDANLGSLPDLDLSDM
TGMGMSMDMDMDMNMGGGGEDDWGLDFDNM
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggactccatggtcaaagaatggacggtattccttgaccgatgcctgaaccagcgagta
ccggccgatctgttcgacgctgcaactacacaactataccgaacatcaccactacctgga
cgcaagctcgccggccttctactgaaaccgcgatctgcacgtgcaaacagtgtcgaccct
cgtgtgatcgtctacctcgagcgcctgctagcgctaaaaagagttgacgcgtcagacgtc
ctgtctgcgacgttctactattcaaaagatcgcctaccgaagaatgacggacatttaact
gaaaatgagccaagatggcacaacgcatccgagttggaggaggttgtatgccaccgtctt
cacaaagcgttcgctgccgaggatcgccctaccaacaacagcgaggggatgcaaacgctc
atcgttgtcacaagatggatgcaggccatggtaacgtcacacaccagcgatacgatgatg
caggctatggccggtatctcgcaacaacctcaacaacagtccatcaacgttcgcgaagct
ctgggcgttcttgtcgtcggtctcatcgagaactccaagatcctgctcattttgagccac
cacactgccacagatttgcgaaaacggttggctcaatcgttggcatcattcattccattc
ttgtctcacaactcgttggggtctcaatcgtcgttggagattgcaaacaggttagagatg
tcacagaaacagcacagcctttacgagaaacctgccaatatcgaaggtgtgccaaatgag
catgccaaccttgaagtggcagctttacagctcgaagcggtcatggatttgccactcgta
tctacacgagctggactctacgtgtttgtcaactcgttacttgttgctcgcccactcacg
gacgagttcacgatcatcaactacttacattcgagatacaagatcgacgctcaaaacatg
gccgcagatctgatcaccgcttcattcgatgttctggccaacgcgatgtaccgcagtgaa
cctagctcaacaatgttccttctgaaatcttttctgatcaacaaggttcccgtattgctg
tcgcaactctcagggtcaatttacccaatgacacccgagatttgcatcacgcaagctctc
agtcacgtcgaccctaatgcttttccggccttctcgcaaggctttgacgacatcatgggc
ggaaacaactcgctttccgatgtgaggcaggattttttgaacgcttgtgcacttcacgga
cacattgctacaaacactgttgagcgactcctgggagagccgcccatacaagggccaccc
gctacaaagtatgacaagaaaacattactggaccagtgcaagaacaatttcgacaaggtc
aatgcttatatcgatgagatggagaatctggacggcaatgctggcgccatcgttggtgct
atcaccgagtttatagcgcatctctgtgagactcaggtgacgatgtatctgaaacacatc
tgcaatctgttgtcgaagaaaccacaatgcttggatgtcatgttgcagtttacctcccct
gccagtatcctgcggccgctgtgccagtttcttgatgagtggcattatgatagcgatcaa
ggcgagtaccagccagtctacgatgagtttggagctatcctcgtcctgatcatggcattt
gtgtatcgctacgatcttacacatcatgacattgggatcaaccatgaatcattcattgct
aggctgattgagcgtggcaaccacagcgttgccccagacaatttgacggaggagcaaggc
aggcaccttgcaagctggctgaaggggctgtacgactccggcaatgaaggtcttagcaac
gatgtattcgcttcatgtcgaccgcaagatttctacttgatagtgccgactttcttcagc
cagacagtcatggcgtgctctgccggtgtactgtcacttgagaccgtgaaaggcggcctg
gaatatctcggcgaaacgttccttttgccttcgttgattggagggcttagttggatggca
agccacgccctcaaacagacacacaacgacctcgacgccatgatgcgaatattccaccag
gcgatcctttcagtaccgtcctcgggagacgcacaggctatgcattctacaatcatagct
atggtgtcaagtcgtctcgagaagtgtttccgcacattgcagcgtcgcgacccacatcga
accaatatcgagcctctcctacaggccatcaaaggtaacgcacactatggccgttccaca
tatgcctcaatcagagagttggaacagtggacgaatgcaccaaatagcacattgaacaca
gcgctgcgacatactatacagcagcttgcgcaatgggcgtctaccgctgctatcaatcct
aatccgcccagctatacacatcggcaagtgtacgcagcatcgaacatgctaggagtatac
caaactgtacgagcgatcgtcgatgaggtcaaagcgcagactgaggctggtaatggtgca
gccgcacttgatattggtgtgtcgatcatctgcgcgccgaccgttgaagacagccctata
ccggtagattggatagggagctcgatttctgcgccggcgccgccacgaaccaggataaat
ctgcgcgagatgctaaagcacctttttgataacgctctcagcttaatcacgacagatcct
tcgagtgcggaagccattgtgcgtctgcatcgacgtgtggaggcacagctcgcctcagtc
gggcaagcaggcctccaagcacctgtcattagccttccaagcgttagtatggacagcatg
caagctcagaacatctccgacgatatcaacaaagccatggaagatgctgccacggctagc
ttagccaacgatatggagataccaagcatggacaagaaggctttggagcgtagcatggaa
gagctcacgggcccagaaggcttaaacctttccggtataggcatggagaccggaactggt
atggcgagtgacatggacgccaacctgggaagcctgccagatctcgacctgagtgacatg
acgggcatgggcatgagcatggacatggatatggatatgaacatgggcggaggtggtgag
gatgactggggcctggacttcgataacatgtag
DBGET
integrated database retrieval system
