Ascochyta rabiei: EKO05_0007630
Help
Entry
EKO05_0007630 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K14311
nuclear pore complex protein Nup188
Organism
arab
Ascochyta rabiei
Pathway
arab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EKO05_0007630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arab03019
]
EKO05_0007630
Messenger RNA biogenesis [BR:
arab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EKO05_0007630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_C
Nup188_N-subdom_III
Nup188_SH3-like
BPD_transp_1
Motif
Other DBs
NCBI-GeneID:
62216155
NCBI-ProteinID:
XP_038797227
LinkDB
All DBs
Position
13:join(119625..119689,119742..125250)
Genome browser
AA seq
1857 aa
AA seq
DB search
MAPIPSSEFDLSKCFKGEQQLVTWDIAYRALCEPETASRSEALRDFLTAPENAEILSRPW
KPFADPSAQEKSKFESKTAPISVTPTQNGHFNLDEIKEDSLWLSKEAQIAEYAALQLVAQ
EWQSRSMVQLLSGLTEEEALSVQDAAGLANFGASTFVPNSSILSTPLASKSTQFDTQDQR
RLRIIDIYYSTCASIIRISQLLISWGAAPYLRSQTIYGNDYHTVGAGWIEELGQKIATAQ
STGPATALDLCLQAVKKRCDALDGGYTWDVPESIVEPASEKWAVAQTVELLHLLHLAHVH
ADVVAKGFVPAATIEEWLTTFMAHGFFREFPVTTARQESLVPVIQLLTSLVSLAILKVDS
IVNDLETGDCTNWETSAYILNTGVIETITNIFGEARALGPSPATPPMFAWAILTWRITNR
ASHEEQVREGLLESPNASRRPQSEPSSIEETAMVISRLEGSELFDGKLPYQDLAEASSAA
GVMVILDQLVETGLSAFGTSVDQISRDRLRLSLLQLLRAALGSEIVVYSPDLIVTAYSIL
GGDRSFRAWAGKGTVHHADPVVSFFLEDEDVLRPLLLNEARLRYPYESTPFLKFFSVLTR
GDKTVQNGLPTFIERLAETNQLMQRLPMGFAGYALTREEENANWVELTADLPLFSSGSIS
SFQGQRRLLTSSSTPRGEGLMMIPAGTEGIIVDDSDQPYVAVWHYQHSTLTYLVQLLSSY
PSGSGRVEYTTQEPASKENAVEIVGLFADLLHSSLQSSDGICSVELLEALSISTDGSHDT
VSIVLAIFEEELLRLCQEPGNEVSLELLVNCTHFLEALVLVAPNRVWPFLARSRLLEGDG
NGGSLAAILIGTEMVLGRYDFLIGCIRLYDRLVTDAVDRSVARKSPSKALSRFNVSNVAE
SGTSDKIMSTTLFTYGRTLASIYESSLSWKYTRPDHRPEINIAICDVFTRILKLAHGVDD
APQLSTKLTKLVAPIAEYITKLYLTKSESNLPTNPILASLVIGAGSDGSTLLTSSAALWR
QQTQATLLFASVLVRVALLLNRPWTHLEQQLFKATPLLARLYATSDRWKSPVVQLLETLV
RGAVRVTESQEPNSSVGQQEPPSLLGYLGSRTAKNFLSILSQLDEPLRIVDIQTDVWNLL
SAVVTCKQQWFSLYLLTGNTPKETLRSKTDSASASGHKSLLTGAIESISNMSLPTSNTAN
LSWPLYTAMLGFITSAQNNWSWAMGDLRKQKGLTQKLLSFLTWMTRQPKNLRSNADILQR
SYQNQFASLACEVLAMYLHSSRQYGDISPLKDVVPALAYLEDNALELPSYNVSLHSNLRQ
NLERQFPGVTLANLKRTALYPESFGRSFFYDVELAEQLLDFDSRWVGPREGTGFVNEVEK
ANYNLGLVESQVQLLQSWKLLALELSHVVGKDERLVQILIGVVRRSMKANAESNLPEALF
GQLMVLRADLAFALLKKLVEAKVHTPESRQLLAPVWNAVRASTQDFDTVFSGDAVHYYRS
LLRILYLALQPHLVEATEQNEEADFRSSFRGTMPASHKTYETSSSTLLLEILSDTIAKGF
RSLANQLHADPSSVAPSDFALLTAILQRIIAIPEMSKWQTQAALLFANSGTIRYATSLFS
WSDRLTISSTATPDPVYGELSLLFLLSLSSIPALAETMAVDGVLSQLNTANLTSYFRRRG
GMGPFDAPTRLHSIWTKGILPLCLNLLLSVGPPLAAEISAFLNQFPEQLARAATALNPTP
SHRTRSVRITLSLASEAHSLALLAAILHNVRKQGPKLGIQASEVALLDWDGDAVKDDVES
WLSRKSALRERVLACDERELDMLRRKRHDGNLLEECVLLELEETGKCLGLAGKTELK
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atggctcccattccatcatccgaattcgacctgtccaagtgcttcaagggcgagcagcag
cttgtgacctgggacattgcataccgcgcactatgtgaacccgaaaccgcatcgaggagc
gaggcactgcgtgacttcctcaccgcgccagagaacgccgagatcctcagccggccctgg
aaacccttcgcagacccgtcagcacaggagaagagcaagtttgaatccaagactgccccc
atcagtgtaacccccacccagaatggccacttcaacctggacgagatcaaggaggacagc
ctgtggctgtcaaaggaggcgcaaatcgcagagtatgcagcgctgcagctggtcgcccaa
gaatggcagagccggtcaatggtccagctgctgagtggactgaccgaagaagaggcgctg
agtgtgcaagacgctgctggccttgccaacttcggcgcatcgaccttcgtccccaactcg
tccatcctctcaacaccactcgcctcgaaatccacacagttcgatacccaagaccagcgt
cgactgcgcatcatcgacatctactactctacatgcgcctccatcattcgaatcagtcag
ctcctcatctcgtggggtgctgcaccgtacctgcgcagccagaccatttacggcaacgac
taccatacagttggcgctggctggatcgaagagcttggccagaagatcgcaacagcgcag
agtactggccccgcaacagcgctggatctgtgccttcaggctgtcaagaagaggtgtgac
gctctcgatggcggttacacgtgggacgtgcccgaatccattgttgagcctgcgtcggaa
aagtgggcggtggcgcagacggttgagcttctgcatctgctgcatctggcgcatgtgcac
gctgatgtagtagccaagggcttcgtgcccgctgcgaccatcgaggaatggctcactacg
ttcatggcacatggattcttccgagagttcccagtcaccactgctcgacaagaatcgctt
gttcctgtcattcagttgttgacctcgcttgtgtctttggcaatcttgaaggtggattcc
atcgtcaacgacctcgagactggagactgcaccaactgggaaacatcggcctacatcctc
aacactggtgttatcgagaccatcaccaacatcttcggtgaagctcgagcattgggaccg
agccctgcaacgccgcccatgtttgcctgggcgatcttgacttggaggattaccaaccgt
gcaagccacgaagaacaggtgcgcgaaggtttgcttgagtcacccaatgcatcgcggagg
cctcagtctgaaccgtcttcaattgaggagacagccatggtcatcagccgcctcgaaggt
tccgagctcttcgatggaaaactaccgtaccaggatcttgccgaggccagttcagctgct
ggcgttatggtgatcctagaccaactcgttgagacaggtttgtctgcattcggaacatct
gtcgatcaaatatcgcgcgacagactacgactatcactcttgcaactccttcgtgctgca
cttgggagtgagatcgtggtctacagcccagatctaattgtcacagcatactcgatcctc
ggaggcgatagatcattccgcgcatgggcgggcaagggaaccgtccaccacgctgatccg
gtagtgtccttcttcttggaggatgaagatgttctcaggccgttgcttctcaacgaagcg
cgccttcgctacccttatgagtcgacgcctttcctcaagttcttcagtgtcctcacccgc
ggtgacaagaccgtccagaatggcctcccgacgttcatcgaaaggctggcagagaccaac
cagctgatgcagcgactccctatggggttcgcaggatatgctttgactcgtgaagaggag
aacgcgaactgggtcgaactcacagcagaccttcctttattctcttctggatccatctcg
agcttccaaggccaacgccgcttgttgacctcctctagcacgccacgtggcgaaggtctc
atgatgatacctgcaggcactgagggtatcattgttgatgacagcgaccagccatacgta
gcggtctggcattatcaacactccactctgacatacctcgttcagctgctctcatcgtac
cccagtggaagcggcagggttgagtatactactcaagagccagcctcgaaagagaacgcg
gtagaaatagtcggccttttcgcggatctgctgcactcatcactccagtcgtctgacggt
atctgctcggttgaactgctagaagcattgagcatcagcacagatggtagccacgacacc
gtcagtatcgtgcttgcgatcttcgaggaagagctactccggttgtgccaagagccaggc
aacgaagtctcgctggagctgctcgtcaattgcacccacttcctggaagcgctggtgctt
gtcgcaccaaacagggtctggccgttcctagcgcgtagccgactgcttgagggagacggc
aacggcggtagccttgcagccatcctgatcggtacagagatggtcctcggccgatacgac
ttcctcattggctgtatacgactctatgacagactggtaacggatgcagttgaccgttct
gtcgcccgtaagagccctagcaaagcactcagccgattcaatgtttccaacgttgcagaa
agtggtacttctgacaagatcatgagtacgaccctcttcacatatggccgcacgctcgca
agtatatacgagagctcattgagctggaagtacacgcgcccggatcaccgcccagagatc
aatatcgcaatttgcgacgtttttaccagaatcttgaagttggctcacggtgtagatgat
gcaccgcagctctcgaccaaactcacaaagctcgttgcacctatcgcggagtacattacc
aaactgtatctgactaaatccgaaagcaacctgccgacaaaccccatcttggcgtcacta
gtcattggtgctggttctgatggctcgactttgctcacaagttcggctgccctctggagg
caacagacccaggccaccttgcttttcgccagcgtcttggtgcgagtagccttgttgctc
aacagaccatggacacaccttgagcaacaactgttcaaggccacaccactgcttgcacgc
ctgtacgcaactagcgacagatggaagtctcccgtagtgcagctcttggaaactctcgtc
aggggcgctgttcgcgttactgagtcacaagagcccaacagctcagttggtcagcaagag
ccgccttctctgcttggctacctaggatctcgcactgcgaagaacttcttgagcatactt
tctcaacttgacgaaccactgaggatagtcgatatccagacagacgtgtggaacttgcta
tctgctgtagttacttgcaaacagcagtggttttcgctatacctactcactggcaacaca
ccgaaggagacactacgatcgaagaccgattctgcgtctgcctcgggacacaaatcactt
ctcacaggagccatagagtccatctctaacatgagcctgccgacttcaaacactgccaac
ctttcatggcctctatacacagcaatgcttggtttcatcacatccgctcaaaacaactgg
tcatgggcaatgggcgatttgcgcaagcaaaaaggcctcactcagaagttgctttcgttc
ctaacctggatgacaaggcaacccaaaaatctcaggtcgaatgcagatattctgcaacgc
tcgtaccagaatcaattcgcgtccttggcgtgcgaggtccttgccatgtaccttcacagt
tcgagacaatacggcgatatcagtccactcaaggatgtcgtccctgcgctggcatacctc
gaagacaatgctctagagcttccatcttataatgtttcgctccacagtaacctcaggcag
aaccttgaacgacaatttcctggcgtcacactggccaatctcaagcggacagcgttgtat
ccagagtcattcggtcggagcttcttctatgacgtcgagcttgccgagcagcttctggac
ttcgacagcaggtgggtagggcctcgagaaggtaccggcttcgtcaacgaagtcgaaaag
gcaaattacaatttgggtctggtcgagtctcaggttcagctgctgcaaagctggaagctg
ctcgcgctcgagctgagccatgttgtaggcaaggacgagcgtttggtgcagatcctcatt
ggagtcgtcaggaggtcgatgaaggccaatgcagagtctaacctgcctgaggcattattt
ggccagctcatggtcctccgtgccgacttagcattcgccctactcaagaagctggtggag
gccaaggtgcacacaccagaatcacgacaacttcttgcccctgtgtggaacgctgtccga
gcttccacgcaggacttcgacactgtcttctccggcgatgcggtccactactaccgctca
ctgttgcgaattctctatcttgctctgcagccccacctcgtcgaagcaacagaacagaac
gaagaggccgacttccgctccagcttccgcgggaccatgccagccagccacaagacgtac
gaaacctccagctccaccctccttctcgagatcctctccgatacgattgccaagggcttc
cgcagtctagccaaccagctgcacgccgacccatcatctgtggcaccctccgacttcgcc
cttctcacagccatcctgcagcgcataattgccatccccgagatgtccaaatggcaaacg
caagccgcgctcctcttcgcaaacagcggcacgatccgctatgcaacctcattattctcc
tggtcggaccgcctcaccatctcctcgaccgccacccccgacccagtctacggcgaactc
tccctcctcttcttgctctctctgtcctcgatccccgccctcgccgaaacgatggccgtc
gacggcgtcctaagccaactcaacacggcaaacctaacgtcctacttccggcgccggggc
ggaatgggacccttcgacgcccccacgcgcctccactcaatatggacaaaaggaatcctc
ccgctctgcctcaacctcctgctcagcgtcggcccacccctcgcagccgaaatctccgct
ttcctaaaccagttcccagagcagctcgcccgcgccgcaaccgccctgaaccccaccccg
tcccaccgcacacgcagcgtccgcatcacgctgtcgcttgcctcggaagcgcactcgctc
gcgctgcttgccgcgatcctgcacaacgtccgcaagcagggccccaagctggggatccag
gccagcgaggttgcgctgctggactgggacggcgacgccgtcaaggacgacgtcgagagc
tggctgagtcgcaagagtgcgctgcgcgagcgcgtccttgcctgcgatgagcgcgagctc
gacatgctgcgtcggaagaggcacgacgggaatctgctcgaagagtgcgtgctgctcgag
ttggaggaaacaggcaagtgcctgggcttggctggaaagaccgagttaaagtag
DBGET
integrated database retrieval system
