Ascochyta rabiei: EKO05_0007659
Help
Entry
EKO05_0007659 CDS
T09445
Name
(RefSeq) DNA-directed DNA polymerase
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
arab
Ascochyta rabiei
Pathway
arab03030
DNA replication
arab03410
Base excision repair
arab03420
Nucleotide excision repair
arab03430
Mismatch repair
arab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EKO05_0007659
03410 Base excision repair
EKO05_0007659
03420 Nucleotide excision repair
EKO05_0007659
03430 Mismatch repair
EKO05_0007659
03440 Homologous recombination
EKO05_0007659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arab03032
]
EKO05_0007659
03400 DNA repair and recombination proteins [BR:
arab03400
]
EKO05_0007659
Enzymes [BR:
arab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EKO05_0007659
DNA replication proteins [BR:
arab03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
EKO05_0007659
DNA repair and recombination proteins [BR:
arab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
EKO05_0007659
MMR (mismatch excision repair)
DNA polymerase delta complex
EKO05_0007659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
DUF2614
divDNApol
DNA_pol_B_exo2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
62216126
NCBI-ProteinID:
XP_038797198
LinkDB
All DBs
Position
13:complement(join(250528..251287,251335..253529,253578..253964))
Genome browser
AA seq
1113 aa
AA seq
DB search
MVGPVTKTPAKRALAEASSNRVNASPRSAKKLKVENGNTTKGPPARKVNGPYNSSQAGPS
QFEDTLEKMTQDIESLKTKNTEKDQQWKRPPLPEDFSEMTSKVVFQQIEAEESVLNGGKP
AVKLFGVTEAGHSVLLHVTGFLHYFYVAAPINFHKEDCRPYQTFLESECQKQFNQHSAVI
ASVQMCMRENILRFQGNQKSPYLKITVNDPKMINRVRMMVQKGNANYKRLWPAREDGILT
FDNIAYVLRFMIDTRIAGMSWVEAPAGKYKLLNPRDQHSNCQIEAQIHYADLIAHQSEGE
WAKSAPLRILSFDIECAGRKGVFPEANIDPVIQIANVVTRNGEEKPFVRNVFSLDTVNPI
VATQIFSYADEGEMLMKWRDFVDEVDPDVITGYNISNFDFPYLLDRAKHLKLAKFPYWSR
LKTVQSKVESSIFSSKQLGSRDTKTTNTNGRIQLDLLQLIQRDHQLRSYTLNSVSAHFLK
EQKEDVHHSMITELFNGDSNSRRRLAVYCLKDAYLPQRLLDKLMCLVNYTEMARVTGVPF
NYLLSRGQQIRFISQLFRKALDHQLVCPDLPNQGDSGDPYEGATVIEPKRGYYKQPVATL
DFASLYPSIMQAHNLCYTTWLDRATVEKLKMKKDEDYIVTPNGDMFCTVKTRKGLLSQIL
EELLGARKRAKRELAVETDPFKKAVLNGRQLALKVSANSVYGLTGATNGKLPCLAIASST
TSFGRQMIEKTKEEVEAKYTIANGYTHDAEVIYGDTDSVMVKFGTSELSEAMKLGEEAAE
YVSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTNPNKWDKMDTKGIETVRRDNCRLVQ
TVIETSLRMLLIDQDPDGAQEFVKDTISDLLQNKIDMSNLVITKALTKQEDKEGKGGYAN
KQAHVELAERMKKRDAGSAPALGDRVAYVMVKGASGSKNYEKSEDPLWVLENNLPIDTRY
YLDNQLAKPLGRIFEPILGEKKANSLLTGEHTRAISVAAPTMGGLMKFAKKTQTCMGCKK
PLTAAHEKEGAVCENCRPRIGELYQKTLSKVSELEVRFSRLWTQCQRCQGSIHCEVICAS
RDCPIFYMRMKARKDVEDAGKEMVRFDKDAALW
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggtcggccctgtaacgaaaacaccggcgaagcgagccctcgctgaagcctcgagtaac
cgcgtaaacgcatcgccccgctccgcgaagaagctcaaagtcgagaatggcaacaccaca
aaagggccgccggctaggaaggtcaatgggccgtacaactcaagccaggcggggccgagc
cagttcgaggatacgctggagaagatgacccaggacatcgaatccttgaagaccaagaac
acagagaaggaccagcaatggaagcggccgccactgcccgaggacttcagtgagatgacc
tcaaaggtcgtctttcagcagatcgaagccgaggaaagtgtactaaatggagggaaacca
gcagtcaagctgtttggtgtcacagaggccggtcactcagtactcctccatgtcaccgga
ttcctccactacttttacgttgctgcgcccatcaacttccacaaagaagactgcaggcca
taccagaccttccttgagagcgaatgccagaagcagttcaaccaacattcagccgtcatc
gcatcggtgcagatgtgcatgagagagaatatcctgcgcttccagggcaatcagaagagt
ccatacctcaaaatcaccgtcaacgatcccaagatgatcaaccgtgtgcgaatgatggtg
cagaagggcaacgccaactacaagcggctctggccagcccgcgaagatggcattttgacc
ttcgacaacatcgcctatgtgctgagattcatgattgacacgagaattgctggcatgtct
tgggtagaggcgcctgctggaaagtataagctactgaacccgcgcgatcaacattccaac
tgccaaatcgaggcgcaaatacactacgccgacctgattgctcatcagtccgaaggcgaa
tgggccaagtcagcacctctccgtattctctccttcgacatcgaatgcgctggtcgcaaa
ggtgttttcccagaagcgaacatcgatcccgtcattcagatagccaatgtcgttacacga
aacggtgaggagaagcctttcgtccggaacgtcttcagtctcgacaccgtcaatcccatt
gtggccacacagatcttctcctacgcggacgagggcgagatgctgatgaagtggcgcgac
ttcgtggacgaagtcgacccagacgtcatcaccggatacaacatttccaacttcgatttc
ccgtatcttctggatcgcgccaaacacttgaagcttgcaaagtttccctactggtcacga
ctgaagacggtgcagtcaaaggtggaaagctcaattttctctagcaagcaactgggaagt
cgagacaccaagactaccaacacgaacggacgcatccaactcgatctcctccagcttatt
cagcgagaccatcaactgcgaagttatactctcaactctgtgagcgcgcacttcctgaaa
gagcagaaggaagacgtccatcacagcatgatcacagagctgtttaacggcgactccaac
tctcgacgacggctggctgtgtactgtttgaaggatgcttatctaccgcagcgacttctg
gacaaactcatgtgtctagtcaattacactgagatggcgagggtcacaggtgtgcctttc
aactacctcctctctcgaggccaacagatcaggttcatcagtcagctgttccgaaaagct
ttagatcatcagcttgtctgcccggacctgcctaaccaaggtgacagtggcgacccgtat
gaaggtgcgaccgtcattgagccaaagcgtggatactacaagcagcctgtcgctacactt
gatttcgcctcgctgtacccaagtatcatgcaagcacacaacctttgctatacgacctgg
cttgacagagcgaccgtagagaagctgaagatgaagaaagacgaagattacatcgtgaca
cctaacggcgacatgttctgtaccgtcaaaacacgcaaaggtctcctctcgcagattctt
gaggaactgctaggtgcccgtaaaagggctaagagagagctcgctgttgaaacagacccg
ttcaagaaggctgtgttgaacggccgtcagctggctctgaaggtcagtgccaactccgtc
tacggtctcacgggtgccacgaatggaaagctgccttgtctggctatcgccagtagtacc
accagttttggtcgtcaaatgattgagaagaccaaggaggaggtcgaagcaaagtacacc
atcgcgaacggttatacccatgatgcggaggtcatctacggtgacaccgattcagttatg
gtcaaattcggtacttctgagctgtcggaagctatgaaactgggggaggaggcagcggaa
tacgtgtcttcgaagttcatcaagcccatcaaactggagttcgagaaggtctacttcccg
tacctgctgatcaacaagaagcgttatgctggcctttactggacaaaccctaataagtgg
gacaagatggacacgaagggtatcgagacagtccgtcgtgacaattgtcgcctcgtgcaa
accgtcatcgaaacatcgctacgcatgctgctgatagaccaagaccctgacggcgcgcaa
gagttcgttaaggataccatctccgatctcctgcagaacaaaattgacatgtccaacctc
gtcattaccaaagcactcaccaagcaagaagataaggaaggcaagggcggttacgccaac
aagcaagcccacgtcgaacttgctgaacgcatgaagaaacgcgatgccggttctgctcca
gcgcttggtgaccgtgtcgcctatgtcatggtcaagggcgccagcggctcgaagaactac
gagaagtccgaggatcctctctgggtgcttgagaacaacctgcccatcgacacacgatac
tatctcgacaaccagctggcgaaaccccttgggaggatcttcgagcctatcctcggcgag
aagaaagcaaattcgctgcttacgggcgagcacacacgagccatctctgtggcggccccg
acgatgggcggtctgatgaagtttgcgaagaagacgcagacatgcatgggctgcaagaag
ccactcaccgccgctcacgagaaggaaggtgcggtgtgcgagaactgccggcctcgcatc
ggcgagctgtaccagaagacgctgagcaaagtcagcgagctggaagttcgcttctcgaga
ctctggacacagtgtcagcgttgccagggcagtattcactgcgaagtgatttgtgcgagt
agagactgccccatcttctacatgcggatgaaggcgaggaaggacgtcgaggatgccggg
aaagaaatggtgcggttcgacaaggacgctgcgctctggtag
DBGET
integrated database retrieval system
